| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1266235 = | 69 (1.410) | 4 (0.090) | 4/236 | NT | 5.7% | coding (1759/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP |
| ? | NC_002947 | 1266275 = | 68 (1.470) | coding (1719/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP | |||||
ACGACCAGGTGACCTTGCTGGCCAACAAGCTCAAGCAGATGTTCGACGCACCCGGCATGGCCCAGCCACTGAAGCAGGCAATCGACGCCCTCCCCGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1266369‑1266235‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcGGGGAGGGCGTCGATTGCCTGCTTCAGTGGCTGGGCCATGCCGGGTGCGTCGAACATCTGCTTGAGCTTGTTGGCCAGCAAGGTCACCTGGTCGTTCTGCAGGGCCATCAGGCTGCGACTGTCGTGGCGACCGTTGCCGGCCAGCTGT > NC_002947/1266275‑1266422 ACGACCAGGTGACCTTGCTGGCCAACAAGCTCAAGCAGATGTTCGACGCACCCGGCATGGCCCAGCCACTGAAGCAGGCAATCGACGCCCTCCCCGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGG > 1:1275929/1‑134ACGACCAGGTGACCTTGCTGGCCAACAAGCTCAAGCAGATGTTCGACGCACCCGGCATGGCCCAGCCACTGAAGCAGGCAATCGACGCCCTCCCCGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGG < 2:1275929/134‑1 CTCCCCGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGGCGGGGAGGGCGTCGATTGCCTGCTTCAGTGGCTGGGCCATGCCGGGTGCGTCGAACATCTGCTTGAGCTTGTTGGCCAGCAAGGTCACCTGGTCGTTCTGCAGGG > 2:498982/1‑150 CCCCGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGGCGGGGAGGGCGTCGATTGCCTGCTTCAGTGGCTGGGCCATGCCGGGTGCGTCGAACATCTGCTTGAG > 1:1135416/1‑110 CCCCGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGGCGGGGAGGGCGTCGATTGCCTGCTTCAGTGGCTGGGCCATGCCGGGTGCGTCGAACATCTGCTTGAG < 2:1135416/110‑1 CGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGGCGGGGAGGGCGTCGATTGCCTGCTTCAGTGGCTGGGCCATGCCGGGTGCGTCGAACATCTGCTTGAGCTTGTTGGCCAGCAAGGTCACCTGGTCGTTCTGCAGGGCCATC < 1:498982/150‑1 CGGCGGGGAGGGCGTCGATTGCCTGCTTAAGTGGCTGGGCCATGCCGGGTGCGTCTTCAATCTGCTTGAGCTTGTTGGCCAGCAAGGTCACCTGGTCGTTCTGCAGGGCCATCAGGCTGCGACTGTCGTGGCGACCGTTGCCGGCCAGCT < 1:655719/150‑1 GCGGGGAGGGCGTCGATTGCCTGCTTCAGTGGCTGGGCCATGCCGGGTGCGTCGAACATCTGCTTGAGCTTGTTGGCCAGCAAGGTCACCTGGTCGTTCTGCAGGGCCATCAGGCTGCGACTGTCGTGGCGACCGTTGCCGGCCAGCTcc < 1:369616/150‑3 ACGACCAGGTGACCTTGCTGGCCAACAAGCTCAAGCAGATGTTCGACGCACCCGGCATGGCCCAGCCACTGAAGCAGGCAATCGACGCCCTCCCCGCCGGGCAGCGCGACAAGGCCCGCGACACGCTGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1266369‑1266235‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcGGGGAGGGCGTCGATTGCCTGCTTCAGTGGCTGGGCCATGCCGGGTGCGTCGAACATCTGCTTGAGCTTGTTGGCCAGCAAGGTCACCTGGTCGTTCTGCAGGGCCATCAGGCTGCGACTGTCGTGGCGACCGTTGCCGGCCAGCTGT > NC_002947/1266275‑1266422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |