| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1366636 = | 51 (1.040) | 4 (0.090) | 4/236 | NT | 7.8% | coding (70/711 nt) | PP_1191 | S4 domain‑containing protein |
| ? | NC_002947 | 1366665 = | 46 (0.990) | coding (41/711 nt) | PP_1191 | S4 domain‑containing protein | |||||
GGCGCATCTGACACAGATTCCCATCATCTACCGCTTGCAGGCAGGTACAATGGAGGCCTTTCCCTGCCTTGCGAATTGCCCCATGTCCGAACCCGTCCGCCTGTCCAAACGCCTCATCGAGCAGCTCGGCTGCTCCCGCCGCGAG‑‑GCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1366787‑1366636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGGGCAATTCGCAAGGCAGGGAAAGGCCTCCATTGTACCTGCCTGCAAGCGGTAGATGATGGGAATCTGTGTCAGATGCGCCATTTTGGACACATAGCGCGGC > NC_002947/1366665‑1366808 GGCGCATCTGACACAGATTCCCATCATCTCCCGCTTGCAGGCAGGTACAATGGAGGCCTTTCCCTGCCTTGCGAATTGCCCCATGTCCGACCCCGTCCGCCTGTCCAAACGCCTCATCGAGCAGCTCGGCTGCTCCCGCCGCGAG‑‑GCCGA < 1:1170207/150‑1GGCGCATCTGACACAGATTCCCATCATCTACCGCTTGCAGGCAGGTACAATGGAGGCCTTTCCCTGCCTTGCGAATTGCCCCATGTCCGAACCCGTCCGCCTGTCCAAACGCCTCATCGAGCGGCTCGGCTGCCCCCGCCGCGAG‑‑GCCGA < 2:1046991/150‑1 GCGCATCTGACACAGATTCCCATCATCTACCGCTTGCAGGCAGGTACAATGGAGGCCTTTCCCTGCCTTGCGAATTACCCCATGTCCGAACCCGTCGGCCTGTCCAAACGCCTCATCGAGCAGCTCGGCTGCTCCCGCCGCGAG‑‑GCCGAG > 1:1228959/1‑150 ACACAGATTCCCATCATCTACCGCTTGCAGGCAGGTACAATGGAGGCCTTTCCCTGCCTTGCGAATTGCCCCATGTCCGAACCCGTCCGCCTGTCCAAACGCCTCATCGAGCAGCTCGGC‑‑CTCGCGGCGGGAGCAGCCGAGCTGCTCGAT < 2:762480/150‑1 CGCTTGCAGGCAGGTACAATGGAGGCCTTTCCCTGCCTTGCGAATTGCCCCATGTCCGAACCCGTCCGCCTGTCCAAACGCCTCATCGAGCAGCTCGGC‑‑CTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGAC < 1:489241/150‑1 CGCCTGTCCAAACGCCTCATGGACAAGATCGGCTGCTACCGTCGCGAG‑‑GCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGGGCAATTCGCAAGGCAGGGAAAGGCCTCCATTGTACCTGCCTGCAAGCGGTA < 2:489241/150‑1 TCCCGCCGCGAG‑‑GCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGGGCAATTCGCAAGGCAGGGAAAGGCCTCCATTGTACCTGCCTGCAAGCGGTAGATGATGGGAATCTGTGTCAGATGCGCCATTTTGGA < 1:762480/150‑1 GCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGGGCAATTCGCAAGGCAGGGAAAGGCCTCCATTGTACCTGCCTGCAAGCGGTAGATGATGGGAATCTGTGTCAGATGCGCCATTTTGGACACATAGCGCGG < 1:106779/150‑1 CCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGGGCAATTCGCAAGGCAGGGAAAGGCCTCCATTGTACCTGCCTGCAAGCGGTAGATGATGGGAATCTGTGTCAGATGCGCCATTTTGGACACATAGCGCGGC > 1:1116188/1‑150 GGCGCATCTGACACAGATTCCCATCATCTACCGCTTGCAGGCAGGTACAATGGAGGCCTTTCCCTGCCTTGCGAATTGCCCCATGTCCGAACCCGTCCGCCTGTCCAAACGCCTCATCGAGCAGCTCGGCTGCTCCCGCCGCGAG‑‑GCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1366787‑1366636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGGGCAATTCGCAAGGCAGGGAAAGGCCTCCATTGTACCTGCCTGCAAGCGGTAGATGATGGGAATCTGTGTCAGATGCGCCATTTTGGACACATAGCGCGGC > NC_002947/1366665‑1366808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |