New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1589058 | 64 (1.300) | 5 (0.110) | 4/236 | NT | 7.4% | coding (83/876 nt) | PP_1393 | transcriptional regulator |
? | NC_002947 | = 1589076 | 64 (1.380) | coding (65/876 nt) | PP_1393 | transcriptional regulator |
ATCAGGGCGAACACCTGCTGCACCCGTGGCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1588905‑1589058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaactTCACCCGCGCCGGGCAGCAGTTGCATATCACCCAGGGCGCTGTCAGCCGCCAGATTGCAGCCCTCGAAGAACACCTCGGTTATGCCCTGTTCAAGCGCGAGGCGCGTGGGTTGAGCCTGACCCGTGAAGGCCTGGACTGGCTGC < NC_002947/1589076‑1588933 ATCAGGGCGAACACCTGCTGCACCCGTGGCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGC > 1:437814/1‑150 TCAGGGCGAACACCTGCTGCACCCGTGGCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGCCGGCTGACAGCGCCCTGGGTGATATGCA > 1:1046381/1‑150 GGGCGAACACCTGCTGCACCCGTGGCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACT < 1:77395/150‑1 GAACACCTGCTGCACCCGTGGCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTTCAC > 1:232709/1‑150 CCGTGGCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATAGGCAACTTCACCCGCGCCGGGCAGCA > 1:80840/1‑150 GCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTTCACCCGCGCCGGGCAGCAGTTGCATA < 2:232709/150‑1 GGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTTCACCCGCGCCGGGCAGCAGTTGCATATCACCCAGG < 2:80840/150‑1 CTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTTCACCCGCGCCGGGCAGCAGTTGCATA < 1:183162/124‑1 CTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTTCACCCGCGCCGGGCAGCAGTTGCATA > 2:183162/1‑124 GCAACTTCACCCGCGCCGGGCAGCAGTTGCATATCACCCAGGGCGCTGTCAGCCGCCAGATTGCAGCCCTCGAAGAACACCTCGGTTATGCCCTGTTCAAGCGCGAGGCGCGTGGGTTGAGCCTGACCCGTGAAGGCCTGGACTGGCTGC < 1:1091656/150‑1 GCAACTTCACCCGCGCCGGGCAGCAGTTGCATATCACCCAGGGCGCTGTCAGCCGCCAGATTGCAGCCCTCGAAGAACACCTCGGTTATGCCCTGTTCAAGCGCGAGGCGCGTGGGTTGAGCCTGACCCGTGAAGGCCTGGACTGGCTGC < 2:565816/150‑1 ATCAGGGCGAACACCTGCTGCACCCGTGGCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1588905‑1589058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaactTCACCCGCGCCGGGCAGCAGTTGCATATCACCCAGGGCGCTGTCAGCCGCCAGATTGCAGCCCTCGAAGAACACCTCGGTTATGCCCTGTTCAAGCGCGAGGCGCGTGGGTTGAGCCTGACCCGTGAAGGCCTGGACTGGCTGC < NC_002947/1589076‑1588933 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |