| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1970782 | 52 (1.060) | 8 (0.190) | 8/210 | NT | 15.7% | intergenic (+33/‑233) | mtnA/PP_mr25 | methylthioribose‑1‑phosphate isomerase/gyrA regulatory region |
| ? | NC_002947 | = 1970844 | 42 (1.020) | intergenic (+95/‑171) | mtnA/PP_mr25 | methylthioribose‑1‑phosphate isomerase/gyrA regulatory region | |||||
TGTTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1970622‑1970782‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccggcctcttcgcgggctCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCAGCATCCGGGC < NC_002947/1970844‑1970697 TGTTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCc > 2:988395/1‑149 CCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCG > 1:557095/1‑150 CCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCG < 1:175724/150‑1 CCCGGTGTTCGATGTAACACCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGC > 2:733567/1‑150 GCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGCGGGCTCGCCCGCCCCCAC > 1:448294/1‑150 CTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCT < 1:1074253/117‑1 CTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCT > 2:1074253/1‑117 TCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCA > 2:812762/1‑150 CGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATA > 1:308478/1‑150 GTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGC < 1:812762/150‑1 TCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCG < 2:557095/150‑1 GAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGTGG < 2:448294/150‑1 CGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCC < 2:308478/150‑1 CCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATC < 1:733567/150‑1 ACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAG < 1:663388/150‑1 CGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGTCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCT > 2:1285243/1‑150 CGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGA < 2:686695/91‑1 CGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGA > 1:686695/1‑91 GCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTG > 1:395609/1‑150 GCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGA > 1:1152536/1‑141 GCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGA < 2:1152536/141‑1 GCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGCCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTG > 2:822216/1‑150 CCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGG < 1:1154904/150‑1 TCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCA < 2:1068616/150‑1 GCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAACCCAGCTGAGCCAGCTTGGCCGCATC > 1:171336/1‑150 GGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCAGCATCCGG < 1:1282310/150‑1 CTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGCGGCCGGTGAGGCGCTACAAAAGCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCAGCATCCGGGC < 1:798590/150‑1 TCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGC < 1:657869/129‑1 TCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGC > 2:657869/1‑129 TCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTG > 2:416362/1‑83 TCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTG < 1:416362/83‑1 TGTTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1970622‑1970782‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccggcctcttcgcgggctCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCAGCATCCGGGC < NC_002947/1970844‑1970697 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |