| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2060566 = | 54 (1.100) | 6 (0.130) | 5/236 | NT | 10.3% | coding (106/939 nt) | PP_1836 | ZIP family metal transporter |
| ? | NC_002947 | 2060593 = | 54 (1.170) | coding (79/939 nt) | PP_1836 | ZIP family metal transporter | |||||
GCAGGTCCCTCGGTAGACTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2060717‑2060566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgagccAGGGGGTATCGATGGCCTGTTGGCGCCAGGCCTGCAGCAGTGAAGGTGGGGCGGCGCTTTGGCTATGGGTGGGTGGCATGCGAACCTCGAATCAGTGAATGCAGTCAGTCTACCGAGGGACCTGCGACATCCGCCAAGGATTCCCTTC > NC_002947/2060593‑2060740 GCAGGTCCCTCGGTAGACTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCTGCAGCTTCACTGCTGCAGGCCAGGCACTCAGACGCAATTGGTATCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGAG > 1:1249171/1‑150GCAGGTCCCTCGGTAGACTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGAG > 2:710077/1‑150GCAGGTCCCTCGGTAGACTGACTGCATCCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGAG > 2:217714/1‑150 CAGGTCCCTCGGTAGACTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGAGC < 2:176865/150‑1 CCTCGGTAGACTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGA < 1:444925/142‑1 CCTCGGTAGACTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGA > 2:444925/1‑142 CTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAACGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGCCCCAGGCC‑GGCACTGAGCCAGGGGGTATCGATGG < 1:145614/150‑1 CTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGCCCCAGGCC‑GGCACTGAGCCAGGGGGTATCGATGG < 2:113004/150‑1 cgatCTGGCTCAGTGCC‑GGCCTGGGGCTGAGCCAGGGGGTATCGATGGCCTGTTGGCGCCAGGCCTGCAGCAGTGAAGGTGGGGCGGCGCTTTGGCTATGGGTGGGTGGCATGCGAACATCGAATCAGTGAATGCAGTCAGTCTACCGAG < 2:874869/146‑1 CCTGGCTCAGTGCC‑GGCCTGGGGCTGAGCCAGGGGGTATCGATGGCCTGTTGGCGCCAGGCCTGCAGCAGTGAAGGTGGGGCGGCGCTTTGGCTATG > 1:105922/1‑97 CCTGGCTCAGTGCC‑GGCCTGGGGCTGAGCCAGGGGGTATCGATGGCCTGTTGGCGCCAGGCCTGCAGCAGTGAAGGTGGGGCGGCGCTTTGGCTATG < 2:105922/97‑1 GCTCAGTGCC‑GGCCTGGGGCTGAGCCAATTGGTATCGATGGCCTGTTGGCGCCAGGCCTGCAGCAGTGAAGGTGGGGCGGCGCTTTGGCTATGGGTGGGTGGCATGCGAACATCGAATCAGTGAATGCAGTCAGTCTACCGAGGagatcg > 1:874869/1‑144 CCAGGGGGTATCGATGGCCTGTTGGCGCCAGGCCTGCAGCAGTGAAGGTGGGGCGGCGCTTTGGCTATGGGTGGGTGGCATGCGAACCTCGAATCAGTGAATGCAGTCAGTCTACCGAGGGACCTGCGACATCCGCCAAGGATTCCCTTC < 2:807807/150‑1 GCAGGTCCCTCGGTAGACTGACTGCATTCACTGATTCGAGGTTCGCATGCCACCCACCCATAGCCAAAGCGCCGCCCCACCTTCACTGCTGCAGGCCTGGCGCCAACAGGCCATCGATACCCCCTGGCTCAGTGCC‑GGCCTGGGGCTGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2060717‑2060566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgagccAGGGGGTATCGATGGCCTGTTGGCGCCAGGCCTGCAGCAGTGAAGGTGGGGCGGCGCTTTGGCTATGGGTGGGTGGCATGCGAACCTCGAATCAGTGAATGCAGTCAGTCTACCGAGGGACCTGCGACATCCGCCAAGGATTCCCTTC > NC_002947/2060593‑2060740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |