| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2234970 = | 53 (1.080) | 5 (0.110) | 5/238 | NT | 8.4% | coding (38/2016 nt) | uvrB | uvrABC excinuclease protein B |
| ? | NC_002947 | 2234999 = | 59 (1.260) | coding (67/2016 nt) | uvrB | uvrABC excinuclease protein B | |||||
CCAGCACCAGCGTCGGGCGCTGCACCTGCTGGATGACGTTGGCAATGCTGAAGGTCTTGCCCGAACCGGTCACCCCGAGCAACGTCTGGTGCGACAGCCCCGCCTCGATGCCTTCGACCAACTGGCGGATAGCCTCG‑GGCTGGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2235119‑2234970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagTTGGTCGAAGGCATCGAGGCGGGGCTGTCGCACCAGACGTTGCTCGGGGTGACCGGTTCGGGCAAGACCTTCAGCATTGCCAACGTCATCCAGCAGGTGCAGCGCCCGACGCTGGTGCTGG > NC_002947/2234999‑2235119 CCAGCACCAGCGTCGGGCGCTGCACCTGCTGGATGACGTTGGCAATGCTGAAGGTCTTGCCCGAACCGGTCACCCCGAGCAACGTCTGGTGCGACAGCCCCGCCTCGATGCCTTCGACCAACTGGCGGATAGCCTCG‑GGCTGGTCGC > 1:1219965/1‑147CCAGCACCAGCGTCGGGCGCTGCACCTGCTGGATGACGTTGGCAATGCTGAAGGTCTTGCCCGAACCGGTCACCCCGAGCAACGTCTGGTGCGACAGCCCCGCCTCGATGCCTTCGACCAACTGGCGGATAGCCTCG‑GGCTGGTCGC < 2:1219965/147‑1 CACCTGCTGGATGACGTTGGCAATGCTGAAGGTCTTGCCCGAACCGGTCACCCCGAGCAACGTCTGGTGCGACAGCCCCGCCTCGATGCCTTCGACCAACTGGCGACCAGCC‑CGAGGCTATCCGCCAGTTGGTCGAAGGCATCGAGGCGG < 2:393115/150‑1 ACCAACTGGCGGATAGCCTCG‑GGCTGGTCGCCAGTTGGTCGAAGGCATCGAGGCGGGGCTGTCGCACCAGACGTTGCTCGGGGTGACCGGTTCGG > 1:637034/1‑95 ACCAACTGGCGGATAGCCTCG‑GGCTGGTCGCCAGTTGGTCGAAGGCATCGAGGCGGGGCTGTCGCACCAGACGTTGCTCGGGGTGACCGGTTCGG < 2:637034/95‑1 ACTGGCGGATAGCCTCG‑GGCTGGTCGCCAGTTGGTCGAAGGCATCGAGGCGGGGCTGTCGCACCAGACGTTGCTCGGGGTGACCGGTTCGGGCAAGACCTTCAGCATTGCCAACGTCATCCAGCAGGTGCAGCGCCCGACGCTGGTGCTG < 1:393115/150‑1 CTGGCGGATAGCCTCG‑GGCTGGTCGCCAGTTGGTCGAAGGCATCGAGGCGGGGCTGTCGCACCAGACGTTGCTCGGGGTGACCGGTTCGGGCAAGACCTTCAGCATTGCCAACGTCATCCAGCAGGTGCAGCGCCCGACGCTGGTGCTGG > 2:868042/1‑150 CCAGCACCAGCGTCGGGCGCTGCACCTGCTGGATGACGTTGGCAATGCTGAAGGTCTTGCCCGAACCGGTCACCCCGAGCAACGTCTGGTGCGACAGCCCCGCCTCGATGCCTTCGACCAACTGGCGGATAGCCTCG‑GGCTGGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2235119‑2234970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagTTGGTCGAAGGCATCGAGGCGGGGCTGTCGCACCAGACGTTGCTCGGGGTGACCGGTTCGGGCAAGACCTTCAGCATTGCCAACGTCATCCAGCAGGTGCAGCGCCCGACGCTGGTGCTGG > NC_002947/2234999‑2235119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |