New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2883565	49 (1.000)	4 (0.080)	4/240	NT	7.7%	coding (82/927 nt)	PP_2539	LysR family transcriptional regulator
	?	NC_002947	= 2883584	49 (1.040)					coding (101/927 nt)	PP_2539	LysR family transcriptional regulator

CCCGCAGACGACGCTCTATAGTGCTCGGCATGACGAAACCCCTGCCGAGCCTGCCTGATGATCCCTTCTCTGGACGCCATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2883427‑2883565 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctTCAGCTGCCTTATGCAGC‑G‑AGCCACAGCGGTCCAGCTCGATCAGCAAGCGCAACTGGCGAAGGCGCAGGCGAGAAAAAATGGCGTCCAGAGAAGGGATCATCAGGCAGGCTCGGCAGGGGTTTCGTCATGCCGAGCACTATAGAGCGTC  <  NC_002947/2883584‑2883436                                                                                                                                                                                                                                                                                                    CCCGCAGACGACGCTCTATAGTGCTCGGCATGACGAAACCCCTGCCGAGCCTGCCTGATGATCCCTTCTCTGGACGCCATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGTGGCTTCAGCTGCCTT                                                                                                                                              >  2:1041617/1‑150                              ATGACGAAACCCCTGCCGAGCCTGCCTGATGATCCCTTCTCTGGACGCCATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGTGGCTTCAGCTGCCTTATGCAGC‑G‑AGCCACAGCG                                                                                                                          <  1:1015087/139‑1                              ATGACGAAACCCCTGCCGAGCCTGCCTGATGATCCCTTCTCTGGACGCCATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGTGGCTTCAGCTGCCTTATGCAGC‑G‑AGCCACAGCG                                                                                                                          >  2:1015087/1‑139                                             CCGAGCCTGCCTGATGATCCCTTCTCTGGACGCCATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGT                                                                                                                                                             >  1:746146/1‑91                                             CCGAGCCTGCCTGATGATCCCTTCTCTGGACGCCATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGT                                                                                                                                                             <  2:746146/91‑1                                                                              CATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGT                                                                                                                                                             >  1:786211/1‑58                                                                              CATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGT                                                                                                                                                             <  2:786211/58‑1                                                                                                                      ATCGAGCTGGACCGCTGTGGC‑TC‑GCTGCATAAGGCAGCTGAAGCCACAGCGGTCCAGCTCGATCAGCAAGCGCAACTGGCGAAGGCGCAGGCGAGAAAAAATGGCGTCCAGAGAAGGGATCATCAGGCAGGCTCGGCAGGGGTTTCGTCA                       >  1:1041617/1‑150                                                                                                                                           TTCAGCTGCCTTATGCAGC‑G‑AGCCACAGCGGTCCAGCTCGATCAGCAAGCGCAACTGGCGAAGGCGCAGGCGAGAAAAAATGGCGTCCAGAGAAGGGATCATCAGGCAGGCTCGGCAGGGGTTTCGTCATGCCGAGCACTATAGAGCGTC  <  1:415821/150‑1                                                                                                                                           TTCAGCTGCCTTATGCAGC‑G‑AGCCACAGCGGTCCAGCTCGATCAGCAAGCGCAACTGGCGAAGGCGCAGGCGAGAAAAAATGGCGTCCAGAGAAGGGATCATCAGGCAGGCTCGGCAGGGGTTTCGTCATGCCGAGCACTATAGAGCGTC  <  2:597083/150‑1                                                                                                                                           TTCAGCTGCCTTATGCAGC‑G‑AGCCACAGCGGTCCAGCTCGATCAGCAAGCGCAACTGGCGAAGGCGCAGGCGAGAAAAAATGGCGTCCAGAGAAGGGATCATCAGGCAGGCTCGGCAGGGGTTTCGTCATGCCGAGCACTATAGAGCGTC  <  2:671959/150‑1                                                                                                                                                                                                                                                                                                    CCCGCAGACGACGCTCTATAGTGCTCGGCATGACGAAACCCCTGCCGAGCCTGCCTGATGATCCCTTCTCTGGACGCCATTTTTTCTCGCCTGCGCCTTCGCCAGTTGCGCTTGCTGATCGAGCTGGACCGCTGTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2883427‑2883565 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctTCAGCTGCCTTATGCAGC‑G‑AGCCACAGCGGTCCAGCTCGATCAGCAAGCGCAACTGGCGAAGGCGCAGGCGAGAAAAAATGGCGTCCAGAGAAGGGATCATCAGGCAGGCTCGGCAGGGGTTTCGTCATGCCGAGCACTATAGAGCGTC  <  NC_002947/2883584‑2883436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.