| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3464323 | 49 (1.000) | 4 (0.100) | 3/202 | NT | 8.5% | coding (78/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 3464362 | 47 (1.190) | coding (39/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein | |||||
CCGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3464153‑3464323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggtttacccgcgaaGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTG < NC_002947/3464362‑3464220 CCGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACCTGT < 2:471872/150‑1CCGCCCTTGGGGGCGGAGGGGTTTACATAGGCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGT < 1:218873/150‑1 CGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTG > 2:1056009/1‑150 GCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGG > 2:791216/1‑150 cccccaaGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGG > 2:442138/8‑150 CCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGG > 2:711210/1‑150 aaGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGG < 1:255133/148‑1 GGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAACGACTATGCACGAAAATACAAGGCCCCCCTATTCTTGTGGGttcgtgt < 2:1013421/150‑8 TTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA > 2:679414/1‑150 TTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGC > 1:20241/1‑150 CACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGG < 2:20241/150‑1 GGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGG < 2:1248077/134‑1 GGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGG > 1:1248077/1‑134 TGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGC > 2:375675/1‑150 TGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTAGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGACTTTACGGTCCAGGCCGCTCCCACCCACGCCC < 2:1075430/150‑1 GGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTT > 1:918019/1‑150 GCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACG < 1:1272131/150‑1 GCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACG < 2:66113/150‑1 GTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCT > 2:944875/1‑150 GTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGC < 1:1120861/139‑1 GTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGC > 2:1120861/1‑139 TTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTA < 1:944875/150‑1 CCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTG > 2:537142/1‑150 CCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGG > 2:112080/1‑82 CCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGG < 1:112080/82‑1 CCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTATGGGGGCTTGTATTTTCGTGCGTAGGCTTTACGGGCCATGCCGCTCCCACCCACGCCCTTACGGTCTACGGTG > 1:607143/1‑150 CCGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3464153‑3464323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggtttacccgcgaaGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTG < NC_002947/3464362‑3464220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |