New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3511747 | 43 (0.880) | 3 (0.060) | 4/238 | NT | 6.5% | coding (372/4158 nt) | PP_3108 | rhs family protein |
? | NC_002947 | = 3511759 | 45 (0.960) | coding (384/4158 nt) | PP_3108 | rhs family protein |
CCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3511593‑3511747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgccCTTGCGCGCGGCGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGGCAATCTGCACCGGCCCTGGGTGCTTGTCGCAGGCACCGATGCTTTTTTCGACGCGGGCGGCCTTGCGGCTGTTGATGAACACGTTGGGTGAGGCAGTG < NC_002947/3511759‑3511612 CCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCG > 2:987252/1‑150 caCAGGGACGATAACCACGGCCTCACCCAACGTGTTCATCAACAGCCGCAAGACCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAATCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACTAACGTCTTCATCAACAGCGTCGC < 1:362285/148‑1 CTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCCTTGCGCGCGGCGGCGACGCTGT > 2:28095/1‑93 CCAACGTCTTCATCAACAGCGTCGCCCTTGCGCGCGGCGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGG < 1:445321/76‑1 CCAACGTCTTCATCAACAGCGTCGCCCTTGCGCGCGGCGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGG > 2:445321/1‑76 ACAGCGTCGCCGCCGCGCGCAAGGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGGCAATCTGCACCGGCCCTGGGTGCTTGTCGCAG > 1:28095/1‑93 GCCCTTGCGCGCGGCGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGGCAATCTGCACCGGCCCTGGGTGCTTGTCGCAGGCACCGATGCTTTTTTCGACGCGGGCGGCCTTGCGGCTGTTGATGAACACGTTGGGTGAGGCAGT > 2:1198929/1‑150 CCCTTGCGCGCGGCGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGGCAATCTGCACCGGCCCTGGGTGCTTGTCGCAGGCACCGATGCTTTTTTCGACGCGGGCGGCCTTGCGGCTGTTGATGAACACGTTGGGTGAGGCAGTG < 2:1182746/150‑1 CCCTTGCGCGCGGCGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGGCAATCTGCACCGGCCCTGGGTGCTTGTCGCAGGCACCGATGCTTTTTTCGACGCGGGCGGCCTTGCGGCTGTTGATGAACACGTTGGGTGAGGCAGTG > 2:984228/1‑150 CCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3511593‑3511747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgccCTTGCGCGCGGCGGCGACGCTGTTGATGAAGACGTTGGTCGAGCCTTCGGCAATCTGCACCGGCCCTGGGTGCTTGTCGCAGGCACCGATGCTTTTTTCGACGCGGGCGGCCTTGCGGCTGTTGATGAACACGTTGGGTGAGGCAGTG < NC_002947/3511759‑3511612 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |