| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3526864 | 49 (1.000) | 4 (0.080) | 4/244 | NT | 7.9% | coding (32/1419 nt) | imuB | DNA repair DNA linked protein |
| ? | NC_002947 | = 3526887 | 45 (0.940) | coding (55/1419 nt) | imuB | DNA repair DNA linked protein | |||||
CGCAGCGCTGCGCATTGCAGTCGACACACGCCCGGCGCAATGGCGCGTGCTGAAAAGCCGGGGTGGCATGCCACCAGCGCTGCCAATACCCTGCCCGGGGCGGGGCTGATGCACCATGCTCTGGGCCTGCATCCTGCTCCCGCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3526718‑3526864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGAGCAGGATGCAGGCCCAGAGCATGGTGCATCAGCCCCGCCCCGGGCAGGGTATTGGCAGCGCTGGTGGCATGCCACCCCGGCTTTTCAGCACGCGCCATTGCGCCGGGCGTGTGTCG < NC_002947/3526887‑3526739 CGCAGCGCTGCGCATTGCAGTCGACACACGCCCGGCGCAATGGCGTGTGCTGAAAAGCCGGGGTGGCATGCCACCAGCGCTGCCAATACCCTGCCCGGGGCGGGGCTGATGCACCATGCTCTGGGCCTGCATCCTGCTCCCGCAG < 1:134429/145‑1CGCAGCGCTGCGCATTGCAGTCGACACACGCCCGGCGCAATGGCGTGTGCTGAAAAGCCGGGGTGGCATGCCACCAGCGCTGCCAATACCCTGCCCGGGGCGGGGCTGATGCACCATGCTCTGGGCCTGCATCCTGCTCCCGCAG > 2:134429/1‑145 ATGCCACCCGCGCTGCCAATACCCTGCCCGGGGCGGGGCTGATGCACCATGCTCTGGGCCTGCATCCTGCTCCCGCAGCTCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGAGCAGG > 1:504435/1‑118 ATGCCACCCGCGCTGCCAATACCCTGCCCGGGGCGGGGCTGATGCACCATGCTCTGGGCCTGCATCCTGCTCCCGCAGCTCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGAGCAGG < 2:504435/118‑1 CCATGCTCTGGGCCTGCATCCTGCTCCCGCAGCTCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGA < 1:1096972/67‑1 CCATGCTCTGGGCCTGCATCCTGCTCCCGCAGCTCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGA > 2:1096972/1‑67 CTCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGAGCAGGATGCAGGCCCAGAGCATGGTGCATCAGCCCCGCCCCGGGCAGGGTATTGGCAGCGCTGGTGGCATGCCACCCCGGCTTTTCAGCACGCGCAATTGCGCCGGGCGTGTGTC < 2:737858/150‑1 TCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGAGCAGGATGCAGGCCCAGAGCATGGTGCATCAGCCCCGCCCCGGGCAGGGTATTGGCAGCGCTGGTGGCATGCCACCCCGGCTTTTCAGCACGCGCCATTGCGCCGGGCGTGTGTCG > 2:92711/1‑150 CGCAGCGCTGCGCATTGCAGTCGACACACGCCCGGCGCAATGGCGCGTGCTGAAAAGCCGGGGTGGCATGCCACCAGCGCTGCCAATACCCTGCCCGGGGCGGGGCTGATGCACCATGCTCTGGGCCTGCATCCTGCTCCCGCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3526718‑3526864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctCACGCAGGACGGTGTCCAGCGCAAGCTGCGGGAGCAGGATGCAGGCCCAGAGCATGGTGCATCAGCCCCGCCCCGGGCAGGGTATTGGCAGCGCTGGTGGCATGCCACCCCGGCTTTTCAGCACGCGCCATTGCGCCGGGCGTGTGTCG < NC_002947/3526887‑3526739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |