| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4524439 = | 61 (1.240) | 7 (0.160) | 7/222 | NT | 12.7% | intergenic (+18/‑175) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
| ? | NC_002947 | 4524474 = | 42 (0.960) | intergenic (+53/‑140) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein | |||||
GGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4524598‑4524439‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGG > NC_002947/4524474‑4524622 GGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGG < 2:979602/150‑1 GTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGT < 2:227929/150‑1 ATGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGT < 2:250979/150‑1 ATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGT < 2:833404/150‑1 ACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGTGCT < 2:418585/150‑1 CCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGT > 1:1019397/1‑145 CCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGT < 2:1019397/145‑1 AGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAA < 2:890098/150‑1 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATAGCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGT < 1:1256226/125‑1 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATAGCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGT > 2:1256226/1‑125 CACAAACCCCGGTGCGTGGCCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCA > 2:263903/1‑150 AAACCCCGGTGCGTGGCCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTT < 2:663980/69‑1 AAACCCCGGTGCGTGGCCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTT > 1:663980/1‑69 AACCCCGGTGCGTGGCCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCA < 1:890098/150‑1 CCCCGGTGCGTGGCCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATG < 2:41841/91‑1 CCCCGGTGCGTGGCCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATG > 1:41841/1‑91 CCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCT < 2:658411/150‑1 TTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATG > 2:934954/1‑150 TGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAG > 2:759529/1‑140 TGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAG < 1:759529/140‑1 GCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCT > 2:1114778/1‑150 TTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGG > 2:326280/1‑150 TTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGG < 1:900108/94‑1 TTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGG > 2:900108/1‑94 GGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAAAGGCCGATGCAGGCCGCCAGATATCATTTATCCAGAAAGCACAAACCCCGGTGCGTGGCCGGGGTTTGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4524598‑4524439‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggtttgtgctTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGG > NC_002947/4524474‑4524622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |