New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4524512 = | 39 (0.800) | 8 (0.180) | 7/222 | NT | 20.1% | intergenic (+91/‑102) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
? | NC_002947 | 4524584 = | 29 (0.670) | intergenic (+163/‑30) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
GAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4524673‑4524512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCCGGCCACC > NC_002947/4524584‑4524728 GAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAA < 2:1010344/150‑1 AGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGATCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGGAAAC > 2:1284452/1‑150 TTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGAGATGGTGCGGCAAATGACGCATTCGCGGGTAAACCCGCTC > 2:555802/1‑150 CTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGC < 1:1284329/144‑1 CTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGC > 2:1284329/1‑144 CTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAAC < 2:597260/85‑1 CTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAAC > 1:597260/1‑85 CCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCC > 1:1137499/1‑65 CCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCC < 2:1137499/65‑1 CTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGA > 1:153428/1‑150 GGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAA > 1:450499/1‑140 GGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAA < 2:450499/140‑1 GTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTC < 2:880632/79‑1 GTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTC > 1:880632/1‑79 CACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTA > 1:630670/1‑56 CACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTA < 2:630670/56‑1 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCGACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGT > 2:1232863/1‑150 GGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAA < 2:153428/150‑1 gaGCGGGTTCACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCA > 1:127659/3‑150 CCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCCG > 1:748203/1‑150 GCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCCGGC < 1:263903/150‑1 CTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCCGGCCACC < 2:127659/150‑1 GAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4524673‑4524512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCCGGCCACC > NC_002947/4524584‑4524728 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |