New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4572333 | 43 (0.880) | 6 (0.130) | 5/238 | NT | 12.4% | coding (2153/2775 nt) | treY | maltooligosyl trehalose synthase |
? | NC_002947 | = 4572365 | 44 (0.940) | coding (2185/2775 nt) | treY | maltooligosyl trehalose synthase |
TGCGTCAATACGCCGAGCGTGTTCGCCAGTGGCAGCAGAAGGCCCTGCGCGAGGCCAAGCTGCGCAGTAGCTGGAGCGCGCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4572183‑4572333 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCCTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCAGGGCCTTCTGC < NC_002947/4572365‑4572217 TGCGTCAATACGCCGAGCGTGTTCGCCAGTGGCAGCAGAAGGCCCTGCGCGAGGCCAAGCTGCGCAGTAGCTGGAGCGCGCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGC < 1:534960/150‑1 AGAAGGCCCTGCGCGAGGCCAAGCTGCGCAGTAGCTGGAGCGCGCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGC < 1:644974/150‑1 GAAGGCCCTGCGCGAGGCCAAGCTGCGCAGTAGCTGGAGCGCGCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCT < 1:1131309/150‑1 GCCCTGCGCGAGGCCAAGCTGCGCAGTAGCTGGAGCGCGCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTG < 1:1014429/147‑1 GCCCTGCGCGAGGCCAAGCTGCGCAGTAGCTGGAGCGCGCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTG > 2:1014429/1‑147 GCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTG < 1:1087979/109‑1 GCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTG > 2:1087979/1‑109 CCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCCTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCA > 1:841233/1‑144 CCAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCCTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCA < 2:841233/144‑1 CAGCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCCTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCAGGGCCTT < 2:838186/150‑1 GCAGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCCTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCAGGGCCTTCT > 2:1119682/1‑150 GCAGCGGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCTTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCAGGGCCTTCT < 1:557295/150‑1 AGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCCTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCAGGGCCTTCTGC < 2:2075/150‑1 TGCGTCAATACGCCGAGCGTGTTCGCCAGTGGCAGCAGAAGGCCCTGCGCGAGGCCAAGCTGCGCAGTAGCTGGAGCGCGCCGAACGAGGCCTACGAAGGCGCCTGCGCTCATTACCTCGACGGCCTGCTGCTGGACAGCGAGAACCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4572183‑4572333 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaGCTGCGCCGCGTCGGCCAGCGACTTGCGCAGTTGCTGGTTCTCGCTGTCCAGCAGCAGGCCGTCGAGGTAATGAGCGCAGGCGCCTTCGTAGGCCTCGTTCGGCGCGCTCCAGCTACTGCGCAGCTTGGCCTCGCGCAGGGCCTTCTGC < NC_002947/4572365‑4572217 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |