| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4573251 = | 57 (1.160) | 5 (0.130) | 5/200 | NT | 9.8% | intergenic (+15/‑122) | PP_4054/glgX | hypothetical protein/glycogen debranching enzyme |
| ? | NC_002947 | 4573318 = | 46 (1.170) | intergenic (+82/‑55) | PP_4054/glgX | hypothetical protein/glycogen debranching enzyme | |||||
GAATGCGCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4573424‑4573251‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggtttacccgcgaagTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTCGGCGCCACCTGGGATGGCC > NC_002947/4573318‑4573466 GAATGCGCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCT < 1:553403/150‑1 TGCGCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTA < 2:223033/150‑1 GCGCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACCTGCTCCTGGGATTAACCTGTAG < 2:315329/150‑1 GCGCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAG < 1:483479/150‑1 GCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTGATGACGATCCTCGAGTGGCCGTGATGGAAGGGGGATTGTGCTGTCCTGCATTGGCAACTTCCCGGGTAAACCCGCTCCTACATTCGCCTGTGATGAAGCTGTAGGA > 2:570193/1‑150 GCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGA < 2:7435/150‑1 GCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGA > 1:7435/1‑150 TGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGG < 2:944343/150‑1 TGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGG < 1:894299/150‑1 GTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGT < 2:581396/150‑1 TGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGCCCCTGTAGTGGCGGGTT > 2:996434/1‑150 GAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGC < 1:584483/150‑1 CGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAA < 2:764870/150‑1 TTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAG > 2:592940/1‑142 TTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAG < 1:592940/142‑1 GGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTAC < 1:775827/91‑1 GGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTAC > 2:775827/1‑91 ACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCAC > 1:421647/1‑150 GCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGC < 2:1214844/91‑1 GCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGC > 1:1214844/1‑91 CCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAA > 2:690166/1‑128 CCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAA < 1:690166/128‑1 TAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCA > 2:1188759/1‑127 TAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCA < 1:1188759/127‑1 AGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCC < 2:777335/150‑1 GAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCACCCTC > 1:635352/1‑150 GCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTCGG > 1:848554/1‑150 CGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCACCCTCGGC < 2:635352/150‑1 GTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTCGGCGCC > 2:215643/1‑150 GTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTC > 1:1149275/1‑144 GTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTC < 2:1149275/144‑1 TTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTCGGCGCCA > 1:957052/1‑150 CCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTGATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTCGGCGCCACCTGG > 2:170380/1‑150 GTGGCCAATGCAGGACAGCACAATTCCACTTCCATTACGGCCACTCGAGGATCGTCATAAGCCCCCGCCCCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTCGGCGCCACCTGGGATGGCC > 2:284602/1‑150 GAATGCGCGATGGTGCGACCGAGCGGGTTTTCTTTGGGGTGCGGGGGCTCATGACGATCCTCGAGTGGCCGTGATGGAAGGGGAATTGTGCTGTCCTGCATTGGCCACTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4573424‑4573251‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggtttacccgcgaagTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCTTCCCCCTCGGCGCCACCTGGGATGGCC > NC_002947/4573318‑4573466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |