New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4647641 | 15 (0.310) | 5 (0.150) | 4/172 | NT | 29.1% | intergenic (+48/+83) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
? | NC_002947 | = 4647671 | 14 (0.410) | intergenic (+78/+53) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
GGGTGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4647455‑4647641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggcctcttcgcgggtaaacccgctcctacaggGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTGAA < NC_002947/4647671‑4647525 GGGTGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCT < 1:1209666/150‑1 GAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGC > 2:793085/1‑150 GGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGGTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAATAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTT > 1:886140/1‑150 GCTACGCCACCTCGATGCGCTCGATGACCAAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTC > 2:1208153/1‑150 GCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGTGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTC < 1:358023/150‑1 GCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCT < 1:793085/150‑1 CCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGC > 2:615330/1‑150 AGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGG > 1:1184349/1‑100 AGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGG < 2:1184349/100‑1 GCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACATGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGT < 1:615330/150‑1 CCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAG < 2:1044653/103‑1 CCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAG > 1:1044653/1‑103 TGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCG < 1:256214/48‑1 TGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCG > 2:256214/1‑48 GCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATC > 1:964146/1‑90 GCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATC < 2:964146/90‑1 TAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATC > 1:67664/1‑82 TAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATC < 2:67664/82‑1 GTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCT > 1:923848/1‑150 TAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTATTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTC > 2:886140/1‑150 ACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGC > 2:272539/1‑150 CCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCAT > 1:1121463/1‑150 GCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGCCGATGGCATCGTCAAga > 1:671678/1‑127 GCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGCCGATGGCATCGTCAAga < 2:671678/129‑3 CTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGG > 1:513758/1‑150 TACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGT > 2:166319/1‑150 TACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGC < 2:1144423/135‑1 TACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGC > 1:1144423/1‑135 ACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGTGCCGCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTG > 2:815010/1‑150 AGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTGAA < 1:166319/150‑1 GGGTGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4647455‑4647641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggcctcttcgcgggtaaacccgctcctacaggGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTGAA < NC_002947/4647671‑4647525 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |