| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4765424 = | 59 (1.200) | 4 (0.090) | 4/234 | NT | 6.3% | coding (32/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
| ? | NC_002947 | 4765465 = | 64 (1.390) | coding (73/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA | |||||
AGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCCGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4765580‑4765424‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAG > NC_002947/4765465‑4765612 AGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCCGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACC > 1:600697/1‑150 GTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCAGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCACTGGCGCTGCAATGCGCAACGCGCCGCGTATGACCAG > 2:499711/1‑150 TCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCCGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCG > 2:1196415/1‑150 ATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCT < 1:1213867/146‑1 ATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCT > 2:1213867/1‑146 GCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAA < 1:624681/98‑1 GCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAA > 2:624681/1‑98 AGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGT > 1:955852/1‑150 GCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGG > 1:1116572/1‑98 GCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGG < 2:1116572/98‑1 CAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAG < 1:1221743/150‑1 AGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCCGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4765580‑4765424‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAG > NC_002947/4765465‑4765612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |