New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4828690 = | 74 (1.510) | 4 (0.090) | 4/232 | NT | 5.7% | coding (2545/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4828734 = | 63 (1.380) | coding (2501/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
TGACCCTGCACCACATCGTTGCCGACGGCTGGTCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4828839‑4828690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggcGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCACCCACAGCTGATGCTCTTC > NC_002947/4828734‑4828858 TGACCCTGCACCACATCGTTGCCGACGGCTGGTCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGC > 1:308157/1‑150 GCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGC < 1:1284942/79‑1 GCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGC > 2:1284942/1‑79 GCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCACCC > 1:583275/1‑150 GCCGACTACGGCAGCTGGCAGCGGCGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCACCCACAGCTGATGCTCTTC < 2:583275/150‑1 TGACCCTGCACCACATCGTTGCCGACGGCTGGTCGCTGAACATCCTGCTCGAAGAATTCGCCAAGCTGTATGCCGCTCGCTGCCAAGGCCTGGAGGCCAACCTGGCGCCGCTGCCGCTGGGTTACGCCGACTACGGCAGCTGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4828839‑4828690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggcGCCAGGTTGGCCTCCAGGCCTTGGCAGCGAGCGGCATACAGCTTGGCGAATTCTTCGAGCAGGATGTTCAGCGACCAGCCGTCGGCAACGATGTGGTGCAGGGTCACCCACAGCTGATGCTCTTC > NC_002947/4828734‑4828858 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |