| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4925156 | 69 (1.410) | 3 (0.060) | 3/236 | NT | 4.7% | intergenic (‑62/+57) | PP_4334/PP_4335 | ParA family protein/flagellar motor protein |
| ? | NC_002947 | = 4925192 | 56 (1.210) | intergenic (‑98/+21) | PP_4334/PP_4335 | ParA family protein/flagellar motor protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTCATCAAGCAAACTCTATCTATTGATTTGGCAGGGACACTGCCTTGCTCAAAATTCGAAAGCTCGCGCAATCAATGTAGGAGCGGGTTTACCCGCGAACACCGGTGCAACCGGTGCCATACACCGCGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4925024‑4925156‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccGCTGTCCCCTGCAGGCGCGGGTTTACCCGCGAGCCGGGCGACGCGGTGTATGGCACCGGTTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATA < NC_002947/4925192‑4925044 CTCATCAAGCAAACTCTATCTATTGATTTGGCAGGGACACTGCCTTGCTCAAAATTCGAAAGCTCGCGCAATCAATGTAGGAGCGGGTTTACCCGCGAACACCGGTGCAACCGGTGCCATACACCGCGTCGC < 1:975045/132‑1CTCATCAAGCAAACTCTATCTATTGATTTGGCAGGGACACTGCCTTGCTCAAAATTCGAAAGCTCGCGCAATCAATGTAGGAGCGGGTTTACCCGCGAACACCGGTGCAACCGGTGCCATACACCGCGTCGC > 2:975045/1‑132 GGCAGGGACACTGCCTTGCTCAAAATTCGAAAGCTCGCGCAATCAATGTAGGAGCGGGTTTACCCGCGAACACCGGTGCAACCGGTGCCATACACCGCGTCGCCGCTGTCCCCTGCAGGCGCGGGTTTACCCGCGAGCCGGGCGACGCGG < 2:538202/150‑1 TCAAAATTCGAAAGCTCGCGCAATCAATGTAGGAGCGGGTTTACCCGCGAACACCGGTGCAACCGGTGCCATACACCGCGTCGCCGCTGTCCCCTGCAGGCGCGGGTTTACCCGCGAGCCGGGCGACGCG > 1:896294/1‑130 TCAAAATTCGAAAGCTCGCGCAATCAATGTAGGAGCGGGTTTACCCGCGAACACCGGTGCAACCGGTGCCATACACCGCGTCGCCGCTGTCCCCTGCAGGCGCGGGTTTACCCGCGAGCCGGGCGACGCG < 2:896294/130‑1 CGCTGTCCCCTGCAGGCGCGGGTTTACCCGCGAGCCGGGCGACGCGGTGTATGGCACCGGTTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATA > 1:1194114/1‑150 CGCTGTCCCCTGCAGGCGCGGGTTTACCCGCGAGCCGGGCGACGCGGTGTATGGCACCGGTTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATA < 2:1066212/150‑1 CTCATCAAGCAAACTCTATCTATTGATTTGGCAGGGACACTGCCTTGCTCAAAATTCGAAAGCTCGCGCAATCAATGTAGGAGCGGGTTTACCCGCGAACACCGGTGCAACCGGTGCCATACACCGCGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4925024‑4925156‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccGCTGTCCCCTGCAGGCGCGGGTTTACCCGCGAGCCGGGCGACGCGGTGTATGGCACCGGTTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATA < NC_002947/4925192‑4925044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |