New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5318238 =	41 (0.840)	3 (0.070)	3/234	NT	8.2%	coding (1184/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
	?	NC_002947	5318270 =	29 (0.630)					coding (1152/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase

CAAGGCGGCGCTGGATGCCTGGTGGAAGCAGATTGACGAATGGCGTGGCAATGGCGAGTTGTTCCCTTACGACAAGGGCGATGGCAACGTCATCAAACCGCAGAAAGTCATCGAGACACTGTGCGAAGTGACCAATGGCGAT‑GCC‑TTCGTCACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5318393‑5318238 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcacttcGCACAGTGTCTCGATGACTTTCTGCGGTTTGATGACGTTGCCATCGCCCTTGTCGTAAGGGAACAACTCGCCATTGCCACGCCATTCGTCAATCTGCTTCCACCAGGCATCCAGCGCCGCCTTGTCAGGCTGCTCGCCGATTTCCT  >  NC_002947/5318270‑5318415                                                                                                                                                                                                                                                                                                                  CAAGGCGGCGCTGGATGCCTGGTGGAAGCAGATTGACGAATGGCGTGGCAATGGCGAGTTGTTCCCTTACGACAAGGGCGATGGCAACGTCATCAAACCGCAGAAAGTCATCGAGACACTGTGCGAAGTGACCAATGGCGAT‑GCC‑TTCGT                                                                                                                                                          <  1:859688/150‑1                      GTGGAAGCAGATTGACGAATGGCGTGGCAATGGCGAGTTGTTCCCTTACGACAAGGGCGATGGCAACGTCATCAAACCGCAGAAAGTCATCGAGACACTGTGCGAAGTGACGAA‑GGC‑ATCGCCATTGGTCACTTCGCACAGTGTCTCGAT                                                                                                                                     <  1:233661/150‑1                                                        GAGTTGTTCCCTTACGACAAGGGCGATGGCAACGTCATCAAACCGCAGAAAGTCATCGAGACACTGTGCGAAGTGACGAA‑GGCATC‑GCCATTGGTCACTTCGCACAGTGTCTCGATGACTTT                                                                                                                               >  1:87941/1‑122                                                        GAGTTGTTCCCTTACGACAAGGGCGATGGCAACGTCATCAAACCGCAGAAAGTCATCGAGACACTGTGCGAAGTGACGAA‑GGCATC‑GCCATTGGTCACTTCGCACAGTGTCTCGATGACTTT                                                                                                                               <  2:87941/122‑1                                                                                                                                                        TCACTTCGCACAGTGTCTCGATGACTTTCTGCGGTTTGATGACGTTGCCATCGCCCTTGTCGTAAGGGAACAACTCGCCATTGCCACGCCATTCGTCAATCTGCTTCCACCAGGCATCCAGCGCCGCCTTGTCAGGCTGCTCGCCGATTT     >  2:700583/1‑150                                                                                                                                                        TCACTTCGCACAGTGTCTCGATGACTTTCTGCGGTTTGATGACGTTGCCATCGCCCTTGTCGTAAGGGAACAACTCGCCATTGCCACGCCATTCGTCAATCTGCTTCCACCAGGCATCCAGCGCCGCCTTGTCAGG                   <  1:1072124/136‑1                                                                                                                                                        TCACTTCGCACAGTGTCTCGATGACTTTCTGCGGTTTGATGACGTTGCCATCGCCCTTGTCGTAAGGGAACAACTCGCCATTGCCACGCCATTCGTCAATCTGCTTCCACCAGGCATCCAGCGCCGCCTTGTCAGG                   >  2:1072124/1‑136                                                                                                                                                           CTTCGCACAGTGTCTCGATGACTTTCTGCGGTTTGATGACGTTGCCATCGCCCTTGTCGTAAGGGAACAACTCGCCATTGCCACGCCATTCGTCAATCTGCTTCCACCAGGCATCCAGCGCCGCCTTGTCAGGCTGCTCGCCGATTTCCT  >  2:1190688/1‑150                                                                                                                                                                                                                                                                                                                  CAAGGCGGCGCTGGATGCCTGGTGGAAGCAGATTGACGAATGGCGTGGCAATGGCGAGTTGTTCCCTTACGACAAGGGCGATGGCAACGTCATCAAACCGCAGAAAGTCATCGAGACACTGTGCGAAGTGACCAATGGCGAT‑GCC‑TTCGTCACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5318393‑5318238 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcacttcGCACAGTGTCTCGATGACTTTCTGCGGTTTGATGACGTTGCCATCGCCCTTGTCGTAAGGGAACAACTCGCCATTGCCACGCCATTCGTCAATCTGCTTCCACCAGGCATCCAGCGCCGCCTTGTCAGGCTGCTCGCCGATTTCCT  >  NC_002947/5318270‑5318415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.