New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5586716 =	54 (1.100)	3 (0.060)	3/242	NT	5.1%	coding (621/1026 nt)	PP_4914	phytase‑like protein
	?	NC_002947	5586744 =	59 (1.240)					coding (593/1026 nt)	PP_4914	phytase‑like protein

CGGATCGACTCGGCCATGGTGCGCCAGGCCCGGGCAAGCGGCATGCTGCTGAACTTCAATGCCCTGTTCGAAGGTTTGGCGATCAACCCGGCGGGTGACCGCCTGTGGCTGGCTGCCGAGCGTGAGCGCCGTGGCCTGGTGGCCATCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5586868‑5586716 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcTCACGCTCGGCAGCCAGCCACAGGCGGTCACCCGCCGGGTTGATCGCCAAACCTTCGAACAGGGCATTGAAGTTCAGCAGCATGCCGCTTGCCCGGGCCTGGCGCACCATGGCCGAGTCGATCCGCAACCAGTCCGGCTCGCCTTCCAG  >  NC_002947/5586744‑5586892                                                                                                                                                                                                                                                                                                                CGGATCGACTCGGCCAACGTGCTTCAGGCCCGGGCAAGCGGCATGCTGCTGAACTTCAATGCCCTGTTCGAAGGTTTGGTGATCAACCCGGCGGGTGACCGCCTGTGGCTGGCTGCCGAGCGTGAGCGCCGTGGCCTGGTGGCCATCGAG                                                                                                                                                          <  1:66390/150‑1  GGATCGACTCGGCCATGGTGCGCCAGGCCCGGGCAAGCGGCATGCTGCTGAACTTCAATGCCCTGTTCGAAGGTTTGGCGATCAACCCGGCGGGTGACCGCCTGTGGCTGGCTGCCGAGCGTGAGCGCCGTGGCCTGGTGGCCATCGAGC                                                                                                                                                         >  2:383866/1‑150  GGATCGACTCGGCCATGGTGCGCCAGGCCCGGGCAAGCGGCATGCTGCTGAACTTCAATGCCCTGTTCGAAGGTTTGGCGATCAACCCGGCGGGTGACCGCCTGTGGCTGGCTGCCGAGCGTGAGCGCCGTGGCCTGGTGGCCATCGAGC                                                                                                                                                         >  2:839005/1‑150                                                                                                                      GAGCGTGAGCGCCGTGGCCTGGTGGCCATCGAGCGCTCACGCTCGGCAGCCAGCCACAGGCGGTCACCCGCCGGGTTGATCGCCAAACCTTCGAACAGGGCATTGAAGTTCAGCAGCATGCCGCTTGCCCGGGCCTGGCGCACCATGGCC                                     >  1:949170/1‑150                                                                                                                           TGAGCGCCGTGGCCTGGTGGCCATCGAGCGCTCACGCTCGGCAGCCAGCCACAGGCGGTCACCCGCCGGGTTGATC                                                                                                          >  1:374482/1‑76                                                                                                                           TGAGCGCCGTGGCCTGGTGGCCATCGAGCGCTCACGCTCGGCAGCCAGCCACAGGCGGTCACCCGCCGGGTTGATC                                                                                                          <  2:374482/76‑1                                                                                                                                                         CTCACGCTCGGCAGCCAGCCACAGGCGGTCACCCGCCGGGTTGATCGCCAAACCTTCGAACAGGGCATTGAAGTTCAGCAGCATGCCGCTTGCCCGGGCCTGGCGCACCATGGCCGAGTCGATCCGCAACCAGTCCGGCTCGCCTTCCAG  >  1:240034/1‑150                                                                                                                                                                                                                                                                                                                CGGATCGACTCGGCCATGGTGCGCCAGGCCCGGGCAAGCGGCATGCTGCTGAACTTCAATGCCCTGTTCGAAGGTTTGGCGATCAACCCGGCGGGTGACCGCCTGTGGCTGGCTGCCGAGCGTGAGCGCCGTGGCCTGGTGGCCATCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5586868‑5586716 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcTCACGCTCGGCAGCCAGCCACAGGCGGTCACCCGCCGGGTTGATCGCCAAACCTTCGAACAGGGCATTGAAGTTCAGCAGCATGCCGCTTGCCCGGGCCTGGCGCACCATGGCCGAGTCGATCCGCAACCAGTCCGGCTCGCCTTCCAG  >  NC_002947/5586744‑5586892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.