New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5698783 = | 66 (1.350) | 6 (0.140) | 6/216 | NT | 10.6% | intergenic (+17/‑150) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
? | NC_002947 | 5698866 = | 44 (1.040) | intergenic (+100/‑67) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
CATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5698935‑5698783 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaaGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTC > NC_002947/5698866‑5699010 CATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGC > 1:269087/1‑150 GCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGC < 1:935947/125‑1 GCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGC > 2:935947/1‑125 GCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGG < 1:349768/111‑1 GCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGG > 2:349768/1‑111 GCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCT > 1:114377/1‑150 CGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCC < 2:114377/150‑1 CACAGGCCCAAGGGTTGTGGTGGCGCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGC < 1:1070547/100‑1 CACAGGCCCAAGGGTTGTGGTGGCGCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGC > 2:1070547/1‑100 CCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGC > 1:762741/1‑84 CCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGC < 2:762741/84‑1 GCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGA < 1:569919/150‑1 CCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGGCGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAG < 1:977098/150‑1 GCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTC > 2:331035/1‑150 CATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5698935‑5698783 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaaGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTC > NC_002947/5698866‑5699010 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |