| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5743392 = | 70 (1.430) | 7 (0.160) | 7/224 | NT | 11.7% | intergenic (‑169/+78) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase |
| ? | NC_002947 | 5743446 = | 43 (0.980) | intergenic (‑223/+24) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase | |||||
TGAACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5743552‑5743392‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACA > NC_002947/5743446‑5743591 TGAACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTAC < 1:764000/150‑1 AACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCAGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCT > 1:58099/1‑150 ACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTAGCGCCGGGCA‑GCCAG‑‑CGCGCAGGTGTCTCTCAAGCTTCAAGGCTTGCGCTGTACCTGTG > 2:997589/1‑150 CGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG < 1:840651/150‑1 ACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGC < 2:1044753/150‑1 ACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTAC > 2:627400/1‑112 ACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTAC < 1:627400/112‑1 TGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTAC > 1:657512/1‑98 TGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTCCAAGGCTTGCGCTGTAC < 2:657512/98‑1 GATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGA < 2:464779/81‑1 GATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGA > 1:464779/1‑81 ATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGC < 2:556492/82‑1 ATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGC > 1:556492/1‑82 AGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGG > 1:1142467/1‑75 AGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGG < 2:1142467/75‑1 TGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGT > 1:383813/1‑150 AGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCC > 1:550326/1‑150 ACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTC < 1:521863/122‑1 ACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTC > 2:521863/1‑122 AGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTT > 2:541384/1‑150 GTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAAC > 2:938677/1‑126 GTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAAC < 1:938677/126‑1 CTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGC < 1:541384/150‑1 ACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTG > 1:861569/1‑150 ACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGC > 2:805537/1‑112 ACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGC < 1:805537/112‑1 ACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGA > 1:439820/1‑94 ACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGA < 2:439820/94‑1 TGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAA < 2:277599/118‑1 TGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAA > 1:277599/1‑118 TGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATC > 2:498979/1‑102 TGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATC < 1:498979/102‑1 GGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCA < 1:1044753/150‑1 GGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCA < 1:307035/150‑1 AGCGAGCGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACA > 1:804005/1‑150 TGAACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTT‑‑CG‑CGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5743552‑5743392‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACA > NC_002947/5743446‑5743591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |