New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5864480	64 (1.300)	3 (0.070)	3/234	NT	4.8%	coding (1727/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase
	?	NC_002947	= 5864515	58 (1.260)					coding (1692/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase
Rejected: Frequency below/above cutoff threshold.

AGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5864324‑5864480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgaccgCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGTGG  <  NC_002947/5864515‑5864367                                                                                                                                                                                                                                                                                                                    AGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCC                                                                                                                                                              <  1:725509/150‑1  GCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCT                                                                                                                                                             >  1:1257765/1‑150  GCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCT                                                                                                                                                             >  1:678472/1‑150     TGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGA                                                                                                                                                          <  2:1106013/150‑1       TCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACC                                                                                                                                                        <  2:1088436/150‑1                                                                  CGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAG                                                                                             <  2:678472/150‑1                                                                                           AGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAA                                                                                                             >  1:355069/1‑109                                                                                           AGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAA                                                                                                             <  2:355069/109‑1                                                                                                                                                         GACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTG      >  2:1257765/1‑150                                                                                                                                                         GACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTG      <  2:864258/150‑1                                                                                                                                                          ACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGG                                                                    >  1:1166299/1‑87                                                                                                                                                          ACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGG                                                                    <  2:1166299/87‑1                                                                                                                                                           CCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGT    <  1:752671/150‑1                                                                                                                                                             GCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGTGG  <  2:311989/150‑1                                                                                                                                                                                                                                                                                                                    AGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5864324‑5864480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgaccgCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGTGG  <  NC_002947/5864515‑5864367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.