New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5895473 =	52 (1.060)	6 (0.130)	6/242	NT	10.1%	coding (759/819 nt)	cysU	sulfate ABC transporter permease CysT
	?	NC_002947	5895510 =	57 (1.200)					coding (722/819 nt)	cysU	sulfate ABC transporter permease CysT

CCTTCGCCCGTGGCGTGGGCGAGTATGGTTCGGTGATCTTCATTGCCGGCAACATGCCGATGAAGACCGAGATTCTGCCGCTGCTGATCATGGTCAAGCTCGACCAGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5895624‑5895473 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGCCGGCAGCAG  >  NC_002947/5895510‑5895658                                                                                                                                                                                                                                                                                                               CCTTCGCCCGTGGCGTGGGCGAGTATGGTTCGGTGATCTTCATTGCCGGCAACATGCCGATGAAGACCGAGATTCTGCCGCTGCTGATCATGGTCAAGCTCGACCAGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGG                                                                                                                                                         <  2:845805/150‑1  CTTCGCCCGTGGCGTGGGCGAGTATGGTTCGGTGATCTTCATTGCCGGCAACATGCCGATGAAGACCGAGATTCTGCCGCTGCTGATCATGGTCAAGCTCGACCAGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGT                                                                                                                                                        >  2:816772/1‑150  CTTCGCCCGTGGCGTGGGCGAGTATGGTTCGGTGATCTTCATTGCCGGCAACATGCCGATGAAGACCGAGATTCTGCCGCTGCTGATCATGGTCAAGCTCGACCAGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGT                                                                                                                                                        >  2:939608/1‑150   TTCGCCCGTGGCGTGGGCGAGTATGGTTCGGTGATCTTCATTGCCGGCAACATGCCGATGAAGACCGAGATTCTGCCGCTGCTGATCATGGTCAAGCTCGACCAGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTG                                                                                                                                                       >  2:678576/1‑150                                                                                                          AGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGGGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAAT                                                                             <  2:743213/121‑1                                                                                                          AGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAAT                                                                             >  1:743213/1‑121                                                                                                                ACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGG                                          >  1:410903/1‑150                                                                                                                     ACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAG                                     <  2:410903/150‑1                                                                                                                     ACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAA                                                                <  1:340142/123‑1                                                                                                                     ACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTGTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAA                                                                >  2:340142/1‑123                                                                                                                                                        GTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGCCGGCAGCAG  <  1:1099152/150‑1                                                                                                                                                        GTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGCCGGCAGCAG  >  1:497140/1‑150                                                                                                                                                                                                                                                                                                               CCTTCGCCCGTGGCGTGGGCGAGTATGGTTCGGTGATCTTCATTGCCGGCAACATGCCGATGAAGACCGAGATTCTGCCGCTGCTGATCATGGTCAAGCTCGACCAGTACGACTACACCGGCGCGACCGCCATCGGCGTGTTGATGCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5895624‑5895473 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgTAGTCGTACTGGTCGAGCTTGACCATGATCAGCAGCGGCAGAATCTCGGTCTTCATCGGCATGTTGCCGGCAATGAAGATCACCGAACCATACTCGCCCACGCCACGGGCGAAGGCCAGGGCAAAGCCGGTGAGCCATGCCGGCAGCAG  >  NC_002947/5895510‑5895658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.