| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6077900 | 42 (0.860) | 4 (0.100) | 4/202 | NT | 9.4% | intergenic (‑146/+92) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| ? | NC_002947 | = 6077952 | 43 (1.090) | intergenic (‑198/+40) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter | |||||
CCGCCATCAAACGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6077730‑6077900‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcctcttcgcggctaaagccgCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATTCATGCGGC < NC_002947/6077952‑6077813 CCGCCATCAAACGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTG > 1:27830/1‑150 TTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCT > 1:41877/1‑150 AGTTTGATGGCTAGCTCGTAGCAGGAATATTGGGGTGGTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAA < 2:714393/150‑1 TTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGC > 1:563915/1‑150 cgTGCTTCTAGTAGGAATATTGGGGTGTTGGATGGAACGGGACCAAGCCTCACCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTTTAGCCGCgaaga < 1:719179/148‑6 CTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTTTAGCCGCgaaga < 1:719213/150‑6 TTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGACTAAAGCCGCTCCTAC > 1:579032/1‑150 TTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCG > 2:1151149/1‑105 TTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCG < 1:1151149/105‑1 TCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGG < 2:579032/150‑1 GCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTT < 1:1193861/146‑1 GCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTT > 2:1193861/1‑146 TGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATC > 2:693587/1‑150 GCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGT > 1:143819/1‑150 CCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTA < 2:814450/150‑1 CCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTA > 2:563915/1‑150 TCTTCGCGGCTAAAGCCGCTCCTACAGGTTATGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATT > 2:445394/1‑150 TCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAACCCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATT > 2:830954/1‑150 TCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATT < 1:693587/150‑1 TCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATAACGTAaaaac < 2:983926/150‑6 GCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATTCATGC < 2:1118977/150‑1 gctttAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATTCATGCG < 2:646296/143‑1 gctttAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATTCATGCG > 1:646296/6‑148 GCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATTCATGCGGC < 1:830954/150‑1 GCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCAT > 2:2275/1‑106 GCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCAT < 1:2275/106‑1 CCGCCATCAAACGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6077730‑6077900‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcctcttcgcggctaaagccgCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGACCTGCTTCCAGTGATGGCCTTTCATCCAATTGTCACAATGAAGTCATATCGTATTCATGCGGC < NC_002947/6077952‑6077813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |