| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 278734 = | 44 (0.900) | 3 (0.080) | 3/202 | NT | 9.9% | intergenic (‑229/+86) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| ? | NC_002947 | 278805 = | 19 (0.480) | intergenic (‑300/+15) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein | |||||
AAAATAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGC > NC_002947/278586‑278883 | aaaaTAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGTTCCTGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCtt > 2:501590/1‑150 (MQ=255) aTAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTcgc < 1:85361/150‑1 (MQ=255) cgggtgattttcttcgacaaaggcgtgatcgtggagcaaggcgaggccaaggccctttttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgagactgcggcctccgagtaaacctgttccggccctTTcgcg > 2:472776‑M1/145‑150 (MQ=255) cgggtgattttcttcgacaaaggcgtgatcgtggagcaaggcgaggcaagcggtctgtttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgggactgcggactccgagtaaacctgttccggccctTTcgcg > 1:403098‑M1/145‑150 (MQ=255) gggtgattttcttcgacaaaggcgtgatcgtggagcaaggcgaggccaaggccctgtttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCgg > 1:738273‑M1/144‑150 (MQ=255) gggtgattttcttcgacaaaggcgtgatcgtggagcaaggcgaggccaaggccctgtttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCgg > 2:1070677‑M1/144‑150 (MQ=255) aGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCgg < 1:948022/150‑1 (MQ=255) aGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCgg < 2:377997/150‑1 (MQ=255) attttcttcgacaaaggcgtgatcgtggagcaaggcgaggccaaggccctgtttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCGGGTaaa > 2:737127‑M1/139‑150 (MQ=255) tCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAAcc > 2:1283506/1‑150 (MQ=255) ttcgacaaaggcgtgatcgtggagcaaggcgaggccaaggcactgtttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCGGGTAAACCCGCt < 1:851721‑M1/18‑1 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTaca < 2:563532/150‑1 (MQ=255) aaaggcgtgatcgtggagcaaggcgaggccaaggccctgtttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCGGGTAAACCCGCTCCTaca > 2:867973‑M1/127‑150 (MQ=255) aaaggcgtgatcgtggagcaaggcgaggccaaggccctgtttgcagcgccgaaggaagagcgtacgcggcagttcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCGGGTAAACCCGCTCCTaca > 2:283338‑M1/127‑150 (MQ=255) aaCAGACGTGTGCTGGTCCGGTGGTTCTGTATATATACCCTAATGCTTTTTAAAATGTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGc < 1:1042674/149‑1 (MQ=255) cAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCt < 2:957050/150‑1 (MQ=255) tgCTGGTCCGGTTGTCCCGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGGGGCTAAACCCGCTCCTACACACATGCCTCAAGATCt < 1:567150/150‑1 (MQ=255) tgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCt < 2:614382/150‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCtgt > 1:676254/1‑150 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCtgt < 2:799790/150‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCtgt < 1:1021187/150‑1 (MQ=255) tacggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCgg < 2:769595/108‑1 (MQ=255) tacggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCgg > 1:769595/3‑110 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGc > 1:958562/1‑118 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGc < 2:958562/118‑1 (MQ=255) tccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa > 1:1126692/1‑146 (MQ=255) tccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa < 2:1126692/146‑1 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa > 1:1210448/1‑144 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa < 2:1210448/144‑1 (MQ=255) ggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 1:1283506/150‑1 (MQ=255) ggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 1:501590/150‑1 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTGTTTGTAATATTTATAGAAGGGGGTTTTGTTACAGAATGGTCGGGACACACGACTTGCAACCGGTTACTACACACATGCCTCAAGATCTGTGCACTGTAGAAGCGAGTGTATCCGCGa > 1:732193/1‑150 (MQ=255) aaggaagagcgtacgcggcagttcctgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAggg > 2:441395‑M1/76‑150 (MQ=255) aTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCaa > 2:763690/1‑110 (MQ=255) aTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCaa < 1:763690/110‑1 (MQ=255) ttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg > 2:813045/1‑150 (MQ=255) aTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAgg < 2:750261/150‑1 (MQ=255) ttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTa < 1:70840/150‑1 (MQ=255) tGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTc < 2:676254/150‑1 (MQ=255) tcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg > 1:629282‑M1/54‑111 (MQ=255) tcttgcgcaagttcctcgggactgcggcctccgagtaaacctgttccggccctTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 2:629282‑M1/58‑1 (MQ=255) ggAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCtgt > 1:640011/1‑87 (MQ=255) ggAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCtgt < 2:640011/87‑1 (MQ=255) tatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAAc < 2:1249926/53‑1 (MQ=255) tatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAAc > 1:1249926/1‑53 (MQ=255) taGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg > 2:270480/1‑92 (MQ=255) taGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 1:270480/92‑1 (MQ=255) ggggATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAAACCGCTCCTACACACATGCCTCAAGATCTGTGTACTGTAGGAGCGGGTTTACCcg > 1:287953/1‑95 (MQ=255) ggggATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAAACCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcg < 2:287953/95‑1 (MQ=255) tttGTTACAGAGTTGTCGGGCTCTTCCCCGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGGAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACt < 1:123370/150‑1 (MQ=255) tACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTc < 2:1067657/110‑1 (MQ=255) tACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTc > 1:1067657/1‑110 (MQ=255) agGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGaa < 1:458064/138‑1 (MQ=255) agGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGaa > 2:458064/1‑138 (MQ=255) cGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg > 2:519592/1‑85 (MQ=255) cGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg < 1:519592/85‑1 (MQ=255) cGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttc < 1:600264/150‑1 (MQ=255) ggCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttcct > 1:115219/1‑150 (MQ=255) TTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTAATCGGAGAACACAGTCGCGTAGGGCAAGCGCGTGAACTGCCGCGTACGCTCTTCCTTCGgc < 2:851721‑M1/150‑1 (MQ=255) | AAAATAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGC > NC_002947/278586‑278883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |