New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 775002	38 (0.770)	4 (0.090)	4/232	NT	10.6%	coding (171/363 nt)	PP_0666	hypothetical protein
	?	NC_002947	= 775029	32 (0.700)					coding (198/363 nt)	PP_0666	hypothetical protein

ACTGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTAGAGGT  >  NC_002947/774867‑775151                                                                                                                                        |                                                                                                                                                      aCTGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCACGCAGCGTGGCCGAGGACCTGCAACAGGATGGGCAGGGGCAGTTGCGTGAGGCGCTGAGCGTGATCGACGTCGTGATGGTGCAAGCGAACGACGGCAGAGCGCGGCTGAcgcg                                                                                                                                         >  2:1229461/1‑150 (MQ=255)   tGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgc                                                                                                                                       >  1:10964‑M1/1‑134 (MQ=255)        gTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAg                                                                                                                                  >  2:315470/1‑150 (MQ=255)            gTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgt                                                                                                                              <  1:1029727/150‑1 (MQ=255)            gTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgt                                                                                                                              >  2:581649/1‑150 (MQ=255)            gTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgt                                                                                                                              <  1:315470/150‑1 (MQ=255)               aCAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGc                                                                                                                           <  2:776538‑M2/150‑2 (MQ=255)                 aGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGctt                                                                                                                         <  1:1086852‑M2/150‑4 (MQ=255)                           tCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgcgtcagctgcgccttgccgacgttg                                                                                                               <  2:10964‑M1/150‑41 (MQ=255)                             gAAACGGCATTCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGAGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGCCGCAGCTGACGGGGGTTCAGATGTGGCTTGCCGACTAcccc                                                                                                             >  2:268708/1‑148 (MQ=255)                                   gcaggcaTCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTc                                                                                                       >  1:1177959/1‑150 (MQ=255)                                         aTCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTc                                                                                                                                    <  1:634026/115‑1 (MQ=255)                                         aTCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTc                                                                                                                                    >  2:634026/1‑115 (MQ=255)                                          tCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgtg                                                                                                                             <  1:240636/121‑1 (MQ=255)                                          tCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgtg                                                                                                                             >  2:240636/1‑121 (MQ=255)                                                       ccTGCAACAGGGTGTACAGATGCAGTGGCGTCAGTCGCGGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTa                                                                                   >  2:1042683/1‑150 (MQ=255)                                                              cAGGATGTGCAGAGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGcc                                                                            <  1:268708/150‑1 (MQ=255)                                                                 gATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTgg                                                                         >  2:1286777/1‑150 (MQ=255)                                                                  aTGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGt                                                                        <  2:1086852/150‑1 (MQ=255)                                                                   tgtgCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGtt                                                                       <  1:776538/150‑1 (MQ=255)                                                                             cAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCtgt                                                             <  2:383744/150‑1 (MQ=255)                                                                               gTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGc                                                           >  2:284931/1‑150 (MQ=255)                                                                               gTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGc                                                           >  2:1248956/1‑150 (MQ=255)                                                                                       aGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCgg                                                   >  1:305351/1‑150 (MQ=255)                                                                                         gcgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgt                                                                                            >  1:483024‑M1/1‑48 (MQ=255)                                                                                         gcgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgt                                                                                            <  2:483024‑M1/107‑60 (MQ=255)                                                                                          cgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCt                                                                           >  1:131352/1‑123 (MQ=255)                                                                                          cgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCt                                                                           <  2:131352/123‑1 (MQ=255)                                                                                           gcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCg                                               >  1:370097/1‑150 (MQ=255)                                                                                            cTGGGCGTGCTCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGCCTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCgg                                              <  1:472273/150‑1 (MQ=255)                                                                                                      tCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTgg                                    <  1:1286777/150‑1 (MQ=255)                                                                                                         aCGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGcttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgc                                                                            >  1:483024‑M2/1‑59 (MQ=255)                                                                                                         aCGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGcttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgc                                                                            <  2:483024‑M2/107‑49 (MQ=255)                                                                                                            gCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCg                              >  2:1129419/1‑150 (MQ=255)                                                                                                             ccTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGa                             >  1:497912/1‑150 (MQ=255)                                                                                                                gATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCaa                                                                   >  1:682820/1‑109 (MQ=255)                                                                                                                gATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCaa                                                                   <  2:682820/109‑1 (MQ=255)                                                                                                                     gggaaGCCCACGTGTGCAAGGTGAAGTGGATGCGGGTTCAGATGTGGCTTGCCCGCTACCGACTCTTCGACCTGGTCTAGGTTGTGGACGAGGTTTGGTATCTAGACAATGCAATACCGGTGCGGGCCCGAGTGGGTGCCGACCTgggtg                     <  2:44224/147‑3 (MQ=255)                                                                                                                        aaGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGggctg                  <  1:1129419/150‑1 (MQ=255)                                                                                                                         aGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGggctgg                 <  2:305351/150‑1 (MQ=255)                                                                                                                            cAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGcttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgcctgacgcaactgcccctgcacatcctgttgcaggtcctcggccacgatgcctgccgtttcga              <  2:10964‑M2/150‑111 (MQ=255)                                                                                                                            cAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGTTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTa              >  1:1231738/1‑150 (MQ=255)                                                                                                                             aaCGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGAATACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTAc             >  1:233771/1‑150 (MQ=255)                                                                                                                              aCGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTAcc            <  1:365746/150‑1 (MQ=255)                                                                                                                               cGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCt           <  1:388458/150‑1 (MQ=255)                                                                                                                                gTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTg          <  1:284931/150‑1 (MQ=255)                                                                                                                                   ggCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTa       <  2:1177959/150‑1 (MQ=255)                                                                                                                                      aaGccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgcctgacgcaactgcccctgcacatcctgttgcaggtcctcggccacgatgcctgccgtttcgaacaggcccct    <  1:1086852‑M1/150‑148 (MQ=255)                                                                                                                                        ggCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTAGAGGt  >  1:615641/1‑150 (MQ=255)                                                                                                                                        gccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgcctgacgcaactgcccctgcacatcctgttgcaggtcctcggccacgatgcctgccgtttcgaacaggcccctgt  <  2:776538‑M1/150‑150 (MQ=255)                                                                                                                                        |                                                                                                                                                      ACTGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTAGAGGT  >  NC_002947/774867‑775151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.