New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 867938 =80 (1.630)7 (0.160) 7/220 NT 9.5% intergenic (+33/+144) PP_0750/mqo‑I hypothetical protein/malate:quinone oxidoreductase
?NC_002947 867998 = 63 (1.460)intergenic (+93/+84) PP_0750/mqo‑I hypothetical protein/malate:quinone oxidoreductase

GAAGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGC  >  NC_002947/867789‑868087
                                                                                                                                                     |                                                                                                                                                     
gtgccgataacgacgcggccctggacctggcagagagcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatg                                                                                                                                                       >  2:679561‑M1/150‑150 (MQ=255)
      ataacgacgcggccctggacctggcagagagcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCt                                                                                                                                                 <  1:1169304‑M1/7‑1 (MQ=255)
      ataacgacgcggccctggacctggcagagagcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctgccgccagctgatcttgtaccgccctcttcgcgggcatGCCCGCt                                                                                                                                                 <  2:743976‑M1/7‑1 (MQ=255)
        cctggacctggaCGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTcc                                                                                                                                               <  2:130842/150‑1 (MQ=255)
           ggacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGcgaagag                                                                                                                                            <  2:193458/150‑7 (MQ=255)
            gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGcc                                                                                                                                                     <  1:945967/140‑1 (MQ=255)
            gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGcc                                                                                                                                                     >  2:945967/1‑140 (MQ=255)
            gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGCGCCGGCCTCTTCGCGGGCGCGcc                                                                                                                                                     <  1:945949/140‑1 (MQ=255)
            gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGCGCCGGCCTCTTCGCGGGCGCGcc                                                                                                                                                     >  2:945949/1‑140 (MQ=255)
            ccgcggccctggacctggcagagagcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCcaca                                                                                                                                           >  1:136496‑M1/138‑150 (MQ=255)
               ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa                                                                                                                                        >  1:120748/1‑150 (MQ=255)
               ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa                                                                                                                                        >  2:885882/1‑150 (MQ=255)
                tggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAg                                                                                                                                       >  1:536302/1‑150 (MQ=255)
                 ggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGt                                                                                                                                      >  1:1044086/1‑150 (MQ=255)
                     ggCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTcgcg                                                                                                                                  <  2:798540/150‑1 (MQ=255)
                                gCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCg                                                                                                                       >  2:353444/1‑150 (MQ=255)
                                 cACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg                                                                                                                      <  1:885882/150‑1 (MQ=255)
                                 cACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg                                                                                                                      <  2:121585/150‑1 (MQ=255)
                                    ggCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCa                                                                                                                   <  1:353444/150‑1 (MQ=255)
                                     gCAAGACCTTTGTCGAGCCGACAGCGCAGCAATCCGATGGCTCTGAGTACATCGATATGATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAt                                                                                                                  <  2:782211/150‑1 (MQ=37)
                                      cAAGACCTTCGTCGAGCAGATTGCCTACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAtt                                                                                                                 >  1:466279/1‑150 (MQ=255)
                                        aGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTAc                                                                                                               <  2:387129/150‑1 (MQ=255)
                                            cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGGCCAGGAGCCAGTGCCGTCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGaa                                                                                                           >  1:796974/1‑150 (MQ=255)
                                            cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAg                                                                                                                                       <  1:667585/122‑1 (MQ=255)
                                            cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAg                                                                                                                                       >  2:667585/1‑122 (MQ=255)
                                            cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGaa                                                                                                           >  1:828420/1‑150 (MQ=255)
                                            cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGaa                                                                                                           >  1:701032/1‑150 (MQ=255)
                                            cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGaa                                                                                                           <  2:440535/150‑1 (MQ=255)
                                                ccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtg                                                                                                       <  2:124261‑M1/49‑1 (MQ=255)
                                                 tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgt                                                                                                      <  2:117595/150‑1 (MQ=255)
                                                   gaacAGATTGACCACGAGCGCAATGCCCGTGAGTACATCGAGATCACCGATAGGGCCCGTGGCTGATCAGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg                                                                                                    >  2:1012414/4‑150 (MQ=255)
                                                   gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg                                                                                                    >  2:1269431/1‑150 (MQ=255)
                                                   gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg                                                                                                    <  2:221699/150‑1 (MQ=255)
                                                   gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg                                                                                                    <  2:536302/150‑1 (MQ=255)
                                                   agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCTGCAGGAGTCGCTCCGCACCTGCGGGCATTACCGAACCTGTgg                                                                                                    >  1:248133‑M1/99‑150 (MQ=255)
                                                     cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGa                                                                                                  >  1:124261‑M1/97‑150 (MQ=255)
                                                      actacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgctggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg                                                                                                     >  1:131511‑M1/96‑146 (MQ=255)
                                                      actacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgctggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg                                                                                                     <  2:131511‑M1/51‑1 (MQ=255)
                                                             ctctccAGCGCAATGCCCGTGAGTACATCGAGTTCATCGATAAAGCCCGTGCCTGATCTGTAGCCAGTGCCGGCCCCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCAt                                                                                          <  2:185869/146‑1 (MQ=255)
                                                                  cAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGGCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATgagct                                                                                     >  1:185869/1‑146 (MQ=255)
                                                                    gcgcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCcgcg                                                                                   >  1:966854/1‑150 (MQ=255)
                                                                     cgcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCACGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAATCTGTAGGAGGAGGCATGCCcgcgg                                                                                  >  2:96517/1‑149 (MQ=255)
                                                                      gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa                                                                                 <  2:966854/150‑1 (MQ=255)
                                                                             cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCg                                                                          >  1:599856/1‑150 (MQ=255)
                                                                             cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCg                                                                          <  2:828420/150‑1 (MQ=255)
                                                                             cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCg                                                                          >  1:1206860/1‑150 (MQ=255)
                                                                              ccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCgg                                                                         >  2:748096/1‑150 (MQ=255)
                                                                              ccTGAGTACATCGAGATCATCGATAAAGCCCGAGGCTTAGCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGACCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCgg                                                                         >  1:743976/1‑150 (MQ=255)
                                                                                  aGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACa                                                                     <  2:796974/150‑1 (MQ=255)
                                                                                    tACATCGAGATCATCTATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAgg                                                                   <  1:370771/150‑1 (MQ=255)
                                                                                     aCATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGc                                                                  <  1:690850/150‑1 (MQ=255)
                                                                                       aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTg                                                                >  2:761599/1‑150 (MQ=255)
                                                                                       aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTg                                                                >  2:138894/1‑150 (MQ=255)
                                                                                         cGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTAc                                                                                                               <  2:977016/101‑1 (MQ=255)
                                                                                         cGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTAc                                                                                                               >  1:977016/1‑101 (MQ=255)
                                                                                            gaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCaa                                                           <  1:1269431/150‑1 (MQ=255)
                                                                                             atcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAg                                                          >  1:1193018/1‑150 (MQ=255)
                                                                                                atcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgcgc                                                       >  2:969298/1‑150 (MQ=255)
                                                                                                atcGATAAAGCCCGTGGCTGATCTGTACCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCCGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgcgc                                                       >  2:983464/1‑150 (MQ=255)
                                                                                                 tcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGcc                                                      >  1:144325/1‑150 (MQ=255)
                                                                                                     tAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa                                                                                 >  1:1033169/1‑119 (MQ=255)
                                                                                                     tAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa                                                                                 <  2:1033169/119‑1 (MQ=255)
                                                                                                         gCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaa                                              >  1:459111/1‑150 (MQ=255)
                                                                                                          cccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaa                                             >  1:1267114/1‑150 (MQ=255)
                                                                                                          cccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaa                                             >  1:1276746/1‑150 (MQ=255)
                                                                                                             gTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAg                                                          >  1:499574/1‑134 (MQ=255)
                                                                                                             gTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAg                                                          <  2:499574/134‑1 (MQ=255)
                                                                                                             gTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaaa                                          >  2:450737/1‑150 (MQ=255)
                                                                                                              tGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAAc                                         <  2:120748/150‑1 (MQ=255)
                                                                                                               ggCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCt                                                                 >  2:444508/1‑125 (MQ=255)
                                                                                                               ggCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCt                                                                 <  1:444508/125‑1 (MQ=255)
                                                                                                                gCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGTCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGc                                       >  2:1180476/1‑150 (MQ=255)
                                                                                                                gCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGc                                       <  2:466279/150‑1 (MQ=255)
                                                                                                                gCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGAATGCCCGCGAAGAGGGCGGTAAAGGCTGAAAAAGCTCCAGGCACAAAAAACGc                                       >  1:167667/1‑150 (MQ=39)
                                                                                                                   cttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGAATTACCGAAc                                                                                                          <  1:415838‑M1/46‑1 (MQ=255)
                                                                                                                   cttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGAATTACCGAAc                                                                                                          >  2:415838‑M1/35‑80 (MQ=255)
                                                                                                                    aTCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCg                                   >  1:1203187/1‑150 (MQ=255)
                                                                                                                     tCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGa                                  <  2:701032/150‑1 (MQ=255)
                                                                                                                     tCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGCGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGa                                  <  1:138894/150‑1 (MQ=255)
                                                                                                                        gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGc                                                                                                >  1:1283068/1‑85 (MQ=255)
                                                                                                                        gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGc                                                                                                <  2:1283068/85‑1 (MQ=255)
                                                                                                                          aGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGc                             <  1:748096/150‑1 (MQ=255)
                                                                                                                            ccAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGt                           >  2:69036/1‑150 (MQ=255)
                                                                                                                                 gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCTGTCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt                      <  1:654434/150‑2 (MQ=255)
                                                                                                                                  ccGGCCTCGTCCCGGGCGCGCCCGCTCCTACAGGAGCCGCGCCCGACCTGTGGTCATTACCGAACCTGTGGGAGCGGGGATTCCTGCGAAGAGGGCGGTACAGGCTGATTAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGc                     <  1:926431/150‑1 (MQ=255)
                                                                                                                                   cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCg                    <  1:1012414/150‑1 (MQ=255)
                                                                                                                                    ggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt                   <  1:69036/150‑1 (MQ=255)
                                                                                                                                       ctctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc                <  1:450737/150‑1 (MQ=255)
                                                                                                                                          ttCGCGGGCGCGCCCGCTCCCACAGGAGTCGAGCCGCTCCTGCGGGCATTACCGCACCTGTGGGAGCGGGCCTGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGa             >  1:622267/1‑150 (MQ=255)
                                                                                                                                           tCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAc            <  2:1203187/150‑1 (MQ=255)
                                                                                                                                            cgcgGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg                                                                                                                      >  1:19703/1‑43 (MQ=255)
                                                                                                                                            cgcgGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg                                                                                                                      <  2:19703/43‑1 (MQ=255)
                                                                                                                                             gcgGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAgg                                                                             >  2:687670/1‑83 (MQ=255)
                                                                                                                                             gcgGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAgg                                                                             <  1:687670/83‑1 (MQ=255)
                                                                                                                                              cgGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCgg         <  2:144325/150‑1 (MQ=255)
                                                                                                                                                     GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc  <  1:185897‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GAAGCTGGCCTGGACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGC  >  NC_002947/867789‑868087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.