New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1419553 =	16 (0.330)	3 (0.080)	3/186	NT	21.5%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	10 (0.270)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein

CCTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCG  >  NC_002947/1419406‑1419688                                                                                                                                                    |                                                                                                                                        ccTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGC                                                                                                                                       <  1:819484‑M1/150‑1 (MQ=255) ccTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCGGGC                                                                                                                                       <  2:404710‑M1/150‑1 (MQ=255)   aaacccaccgcccacagctcgatcgtgatgcaggccgtgatccatgaaatggaagcggtacaggggctggtcgagtcggcgttgatgcagttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCct                                                                                                                                     <  1:212792‑M1/5‑1 (MQ=255)    ggCGGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTC                                                                                                                                    >  2:936375‑M1/1‑150 (MQ=255)       aGGGGATGCCGAGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTC                                                                                                                                 >  1:377870‑M1/1‑150 (MQ=255)           gATGCCGGGTTCGATGCGGAACAGCGGGTGTGTGTTGTTTTTGCCTTTGTATAAGCATTTCTTGCCTTCTGTGGTTTGTTCTGTTGTGTTGTCGGTGTGCATTGTTTTGTTTCCCTGGATTCTGGGTTGTCTGGTCTGGCCTCGTCGCgg                                                                                                                             <  2:903688/150‑1 (MQ=255)           gATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGG                                                                                                                             <  2:918787‑M1/150‑1 (MQ=255)            aTGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTACTCTGGATTCTGGGTTGCCTGTGCTGGCATCTTAGCGaa                                                                                                                            >  1:903688‑M1/1‑148 (MQ=255)             tGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGC                                                                                                                           >  1:1069885‑M1/1‑150 (MQ=255)             tGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGC                                                                                                                                       <  2:650647‑M1/138‑1 (MQ=255)             tGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGC                                                                                                                                       >  1:650647‑M1/1‑138 (MQ=255)                    ctcgatcgtgatgcaggccgtgatccatgaaatggaagcggtacaggggctggtcgagtcggcgttgatgcagttgcggatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCg                                                                                                                    <  1:881313‑M1/22‑1 (MQ=255)                        aTGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCC                                                                                                                <  1:531804‑M1/150‑1 (MQ=255)                           cGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCAC                                                                                                             <  1:936375‑M1/150‑1 (MQ=255)                             gatgcaggccgtgatccatgaaatggaagcggtacaggggctggtcgagtcggcgttgatgcagttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                           >  2:899608‑M1/120‑150 (MQ=255)                             gAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                           >  2:679173‑M1/1‑150 (MQ=255)                                    gggTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcacc                                                                                                    >  1:813015‑M1/1‑144 (MQ=255)                                         aGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTATGGGTTGCCTTGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGt                                                                                               >  2:999200/1‑150 (MQ=255)                                           tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGc                                                                                             <  1:1075994/150‑1 (MQ=255)                                                       cTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                          <  2:404669‑M1/125‑1 (MQ=255)                                                       cTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                          >  1:404669‑M1/1‑125 (MQ=255)                                                        ttGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcac                                                                                >  2:1202386‑M1/1‑124 (MQ=255)                                                        ttGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTgtgg                                                                                >  2:42350/1‑150 (MQ=255)                                                          ggTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGC                                                                                                                                       <  2:1118328‑M1/93‑1 (MQ=255)                                                          ggTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGC                                                                                                                                       >  1:1118328‑M1/1‑93 (MQ=255)                                                             ataagcAGCTCTTGCCGACTGCGGTGGGTTCTGTTGTGTTGTAGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACc                                                                           >  2:908512‑M2/3‑149 (MQ=255)                                                             aGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCTGCTGTGCAGTGCGTGACGGCTGTGGTGACc                                                                           >  1:999200‑M2/1‑149 (MQ=255)                                                                 gCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcccgt                                                                       <  1:225440‑M2/150‑6 (MQ=255)                                                                 gCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgt                                                                       >  1:42350‑M2/1‑145 (MQ=255)                                                                 gCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgt                                                                       >  1:679173‑M2/1‑145 (MQ=255)                                                                 gCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCAACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgt                                                                       <  2:1003097‑M2/150‑6 (MQ=255)                                                                   aGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgg                                                                     <  1:532849‑M1/150‑38 (MQ=255)                                                                   aGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgg                                                                     >  2:827506‑M2/1‑143 (MQ=255)                                                                     gTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACtg                                                                                                     >  1:167796/1‑116 (MQ=255)                                                                     gTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACtg                                                                                                     <  2:167796/116‑1 (MQ=255)                                                                     ctggtcgagtcggctttgatgcagttgcagatacggtctcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGa                                                                   >  1:1097223‑M1/80‑150 (MQ=255)                                                                       ggtcgagtctgcgttgatgcagttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACACGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGc                                                                 >  2:191318‑M1/78‑150 (MQ=255)                                                                        ttGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcg                                                                <  1:1202386‑M1/150‑43 (MQ=255)                                                                         tcgagtcggcgttgatgcagttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                               >  1:937466‑M1/76‑150 (MQ=255)                                                                           ccGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggc                                                             <  2:813015‑M1/150‑46 (MQ=255)                                                                           ccGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggc                                                             <  2:635555‑M1/150‑46 (MQ=255)                                                                           ccGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctttgggagcgggc                                                             >  2:377870‑M2/1‑135 (MQ=255)                                                                           ccGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgt                                                                       >  1:749920‑M2/1‑135 (MQ=255)                                                                           ccGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgt                                                                       <  2:749920‑M2/140‑6 (MQ=255)                                                                                tgtgGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCC                                                                                                                     <  1:950521‑M1/89‑1 (MQ=255)                                                                                tgtgGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCC                                                                                                                     >  2:950521‑M1/1‑89 (MQ=255)                                                                                     tggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgg                                                                     <  1:92364‑M2/132‑8 (MQ=255)                                                                                     tggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgg                                                                     >  2:92364‑M2/1‑125 (MQ=255)                                                                                        gTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaaga                                                >  1:430674‑M2/1‑122 (MQ=255)                                                                                         ttCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTC                                                                                                                 <  2:296554‑M1/84‑1 (MQ=255)                                                                                         ttCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTC                                                                                                                 >  1:296554‑M1/1‑84 (MQ=255)                                                                                           agttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGc                                                                                                                       >  2:359658‑M1/58‑76 (MQ=255)                                                                                           agttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGc                                                                                                                       <  1:359658‑M1/19‑1 (MQ=255)                                                                                                               aTTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGa                                                                                         <  2:969673/86‑1 (MQ=255)                                                                                                               aTTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGa                                                                                         >  1:969673/1‑86 (MQ=255)                                                                                                                 tgttttgtttCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGgtgt                       <  2:1069885/150‑1 (MQ=255)                                                                                                                     acagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTccc                                                                                                               >  1:647819‑M1/32‑58 (MQ=255)                                                                                                                     acagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTccc                                                                                                               <  2:647819‑M1/27‑1 (MQ=255)                                                                                                                       gtttCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGgtcaggc                    <  1:625699/147‑6 (MQ=255)                                                                                                                       gtttCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGgtcaggc                    >  2:625699/1‑142 (MQ=255)                                                                                                                        tttCCCTGGATTCTGGGTTGCCTGGGCTGGCATCTTCGCGGGCACGCCCACTCCCACAGGTACTGTGCAGTGCGTGACg                                                                                       <  2:191126/79‑1 (MQ=255)                                                                                                                        tttCCCTGGATTCTGGGTTGCCTGGGCTGGCATCTTCGCGGGCACGCCCACTCCCACAGGTACTGTGCAGTGCGTGACg                                                                                       >  1:191126/1‑79 (MQ=37)                                                                                                                             cTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTTGGGTGACcctgtgggagc                                                                 >  2:1277408‑M2/1‑85 (MQ=255)                                                                                                                             cTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagc                                                                 <  1:1277408‑M2/96‑12 (MQ=255)                                                                                                                             cTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCt                                           >  2:648020/1‑118 (MQ=255)                                                                                                                             cTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCt                                           <  1:648020/118‑1 (MQ=255)                                                                                                                                      gggTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCg  >  2:939032/1‑150 (MQ=255)                                                                                                                                            ccTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtggga                                                                   <  2:1101675‑M2/79‑10 (MQ=255)                                                                                                                                            ccTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtggga                                                                   >  1:1101675‑M2/1‑70 (MQ=255)                                                                                                                                                    |                                                                                                                                        CCTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCG  >  NC_002947/1419406‑1419688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.