New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5874604 =	71 (1.450)	6 (0.130)	6/228	NT	8.1%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5874686 =	71 (1.590)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase

TCGCCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTC  >  NC_002947/5874455‑5874750                                                                                                                                                       |                                                                                                                                                    tCGCCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGcttct                                                                                                                                                     >  1:1026989/1‑150 (MQ=255) tCGCCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGcttct                                                                                                                                                     >  1:960001/1‑150 (MQ=255)  gtggtggcggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccatactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctt                                                                                                                                                     <  2:433768‑M1/1‑1 (MQ=255)   gccaggACGGCGAGCGCGCGAGGTCAGGATCTCCAGGCCCAGGCCGCCCAGACACAGCCGCGCGGGGGCCATGATGTGCAGGGTCTGGAGCGTGGTCAGGTGTTCAATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCttcttc                                                                                                                                                   <  2:14426/145‑1 (MQ=255)    cccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTcg                                                                                                                                                  >  1:1141378/1‑150 (MQ=255)    cccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTACTTAAACTGGCATTTTGAG‑GTAGCTTCTTcg                                                                                                                                                  >  2:713007/1‑150 (MQ=255)       tGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCgg                                                                                                                                               <  2:960001/150‑1 (MQ=255)       tGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCgg                                                                                                                                               <  1:424772/150‑1 (MQ=255)          ggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGc                                                                                                                                             >  2:149429‑M1/142‑150 (MQ=255)              gAGCGCGCCAGGTCCAGATCGCTAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTAcc                                                                                                                                        <  2:498949/150‑1 (MQ=255)               aGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTAccc                                                                                                                                       <  2:339387/150‑1 (MQ=255)               aGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTAccc                                                                                                                                       <  2:773720/150‑1 (MQ=255)                          tCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTTCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCaa                                                                                                                            >  1:590975/1‑150 (MQ=255)                          tCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCaa                                                                                                                            <  1:433742/150‑1 (MQ=255)                             aGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGt                                                                                                                         <  2:1026989/150‑1 (MQ=255)                             aGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATAATATACAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCATTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGt                                                                                                                         >  1:554018/1‑150 (MQ=255)                               aTCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATGTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTAt                                                                                                                       >  2:926939/1‑150 (MQ=255)                                       gCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGcc                                                                                                               <  2:767074/150‑1 (MQ=255)                                       gCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGcc                                                                                                               >  2:115578/1‑150 (MQ=255)                                            gggCGCCCAGAAACAGCATCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAg                                                                                                          <  1:514172/150‑1 (MQ=255)                                            gggCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAg                                                                                                          <  2:554018/150‑1 (MQ=255)                                                  ccAGAAACAGCAGCTCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTgc                                                                                                    >  2:956267/1‑150 (MQ=255)                                                  ccAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTGTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTCAAGGCCTga                                                                                                    <  1:820398/150‑2 (MQ=255)                                                  ccAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTgc                                                                                                    >  2:935208/1‑150 (MQ=255)                                                  ccAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCAGCTCCTGCCaa                                                                                                                            <  2:300348/126‑1 (MQ=255)                                                  ccAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCAGCTCCTGCCaa                                                                                                                            >  1:300348/1‑126 (MQ=255)                                                           gccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCtt                                                                                                                                           >  2:264005‑M1/93‑103 (MQ=255)                                                           gccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCtt                                                                                                                                           <  1:264005‑M1/11‑1 (MQ=255)                                                           gcagcGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCt                                                                                          >  1:693714/1‑150 (MQ=255)                                                            ccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCt                                                                                          <  2:895825‑M1/59‑1 (MQ=255)                                                             agcGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCtgt                                                                                        <  1:115578/150‑1 (MQ=255)                                                               ggcgGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTgg                                                                                      <  2:230274/149‑1 (MQ=255)                                                                 atcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTggg                                                                                     <  1:850180‑M1/64‑1 (MQ=255)                                                                    tGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCg                                                                                 >  1:361739/1‑150 (MQ=255)                                                                    tGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCg                                                                                 >  1:870575/1‑150 (MQ=255)                                                                     ggCGATGATGTGCCGGGCTTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTAGTCCATACGTGTGC‑TCTTCCGATTAGGTTCTTCGCGCGTTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCgg                                                                                <  1:1254525/150‑1 (MQ=255)                                                                          ccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCaa                                                                            >  1:895825‑M1/78‑150 (MQ=255)                                                                           gatgTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGc                                                                          <  2:510092/150‑1 (MQ=255)                                                                           gatgTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGc                                                                          >  1:463352/1‑150 (MQ=255)                                                                           cgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAg                                                                           >  2:850180‑M1/77‑150 (MQ=255)                                                                            atgTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTAGCGGGCTTACCCGCTCCTGCCAAGGTATCTCANGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGcc                                                                         <  1:926939/150‑1 (MQ=255)                                                                                   gggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTTCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGaaa                                                                  <  2:590975/150‑1 (MQ=255)                                                                                   gggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGaaa                                                                  <  2:870575/150‑1 (MQ=255)                                                                                    ggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGa                                                                                                           >  2:51234/1‑109 (MQ=255)                                                                                    ggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGa                                                                                                           <  1:51234/109‑1 (MQ=255)                                                                                            gCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTTAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCa                                                         <  1:733146/150‑1 (MQ=255)                                                                                                ggTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                     >  2:306832/1‑150 (MQ=255)                                                                                                  tCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                     <  2:207534/148‑1 (MQ=255)                                                                                                  tCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                     >  1:207534/1‑148 (MQ=255)                                                                                                  tCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTa                                                   >  1:1028236/1‑150 (MQ=255)                                                                                                    aGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGc                                                 >  1:126398/1‑150 (MQ=255)                                                                                                         ttCCATCTCGCCGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGc                                            <  1:903713/150‑1 (MQ=255)                                                                                                          tCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCcgc                                                                      >  1:308201/1‑123 (MQ=255)                                                                                                          tCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCcgc                                                                      <  2:308201/123‑1 (MQ=255)                                                                                                           ccATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCg                                          >  2:296936/1‑150 (MQ=255)                                                                                                             actgttcctgggctgagcggctaagctagggctgatggccctTTCGCggg                                                                                                                                              >  2:1193313‑M1/43‑50 (MQ=255)                                                                                                             actgttcctgggctgagcggctaagctagggctgatggccctTTCGCggg                                                                                                                                              <  1:1193313‑M1/8‑1 (MQ=255)                                                                                                             aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGtg                                                                                             >  1:1225625/1‑96 (MQ=255)                                                                                                             aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCggg                                                                               <  1:895568/111‑1 (MQ=255)                                                                                                             aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCggg                                                                               >  2:895568/1‑111 (MQ=255)                                                                                                             aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGcc                                        >  2:863394/1‑149 (MQ=255)                                                                                                             aTCTCTCGGTCGTCCTTAAACTGGCATTGTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTa                                                                                             <  2:1225625/97‑1 (MQ=255)                                                                                                                tctcGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGACCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAg                                     >  1:7353/1‑150 (MQ=255)                                                                                                                tctcGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCATCTTCGCGGGATTACCGGCTCCAGCCAGGGTAGGTGAGTCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAg                                     >  2:1110772/1‑150 (MQ=38)                                                                                                                    ggTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCa                                 >  1:576450/1‑150 (MQ=255)                                                                                                                    ggTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCa                                 <  1:956267/150‑1 (MQ=255)                                                                                                                     gtcgtcCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGctcagctcag                                <  1:351599/150‑1 (MQ=255)                                                                                                                     gtcgtcCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGctcagctcag                                >  2:351599/1‑150 (MQ=255)                                                                                                                       cgtcCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGc                                                 >  1:854535/1‑131 (MQ=255)                                                                                                                       cgtcCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGc                                                 <  2:854535/131‑1 (MQ=255)                                                                                                                         tcCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAAc                            <  1:1194019/150‑1 (MQ=255)                                                                                                                           cTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                          >  1:300026/1‑150 (MQ=255)                                                                                                                           cTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                          >  2:1161216/1‑150 (MQ=255)                                                                                                                            ttAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGt                         >  1:851590/1‑150 (MQ=255)                                                                                                                               aaCTTGCATTTTCCG‑GTAGCTTCTTCGCGGGCTTCCCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTg                      <  2:851590/150‑1 (MQ=255)                                                                                                                                aCTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGt                     <  2:693714/150‑1 (MQ=255)                                                                                                                                  taagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCggg                                                                               <  1:486817‑M1/70‑1 (MQ=255)                                                                                                                                  taagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCggg                                                                               >  2:486817‑M1/22‑91 (MQ=255)                                                                                                                                  tGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAg                   >  1:1079359/1‑150 (MQ=255)                                                                                                                                    gCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGc                 >  2:58982/1‑150 (MQ=255)                                                                                                                                       ttttGCG‑GTAGCTTCTTCGTGGGCTGACCTGCGCCGTATGATGTATCTCAGGCCTTGAGGCCTGAGCTAATATTTGT‑GGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCNCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCgg              <  1:863394/150‑1 (MQ=255)                                                                                                                                       ttttGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCgg              <  2:126398/150‑1 (MQ=255)                                                                                                                                               gTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGTAGCgg                                                                                <  2:879920/77‑1 (MQ=255)                                                                                                                                               gTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGTAGCgg                                                                                >  1:879920/1‑77 (MQ=255)                                                                                                                                               gTAGCTTCTTCCCGGGCTTTCCCGTTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCg       <  1:602466/150‑1 (MQ=255)                                                                                                                                                tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCAt                                                           >  2:884110/1‑97 (MQ=255)                                                                                                                                                tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCAt                                                           <  1:884110/97‑1 (MQ=255)                                                                                                                                                tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCgg      <  2:1028236/150‑1 (MQ=255)                                                                                                                                                    ttcttcGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtctc  >  1:1049217/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                    TCGCCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCG‑GTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTC  >  NC_002947/5874455‑5874750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.