New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2295818 =	49 (1.000)	7 (0.180)	7/202	NT	17.4%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	27 (0.680)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein

GCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCG  >  NC_002947/2295754‑2296046                                                                                                                                                      |                                                                                                                                                gcgcCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCacac                                                                                                                                                 <  2:540902/150‑1 (MQ=255)    ccAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGa                                                                                                                                              >  2:606492/1‑150 (MQ=255)         agctgttcaaggcaatcatgggccgctgattaaacatcgggctgcacatgggtccgggtgggagcgggcaggcccgcgaagcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggcatgcccgctcccacaCGGACCCAt                                                                                                                                         <  2:242584‑M2/9‑1 (MQ=255)           ctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacatgggtcctTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCAtgt                                                                                                                                       >  1:19561‑M1/55‑150 (MQ=255)           ccATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCAtgt                                                                                                                                       <  2:637242/150‑1 (MQ=255)                 aaggcaatcatggtccgctgattaaacatcgggctgcacatgggtccgTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCTCGCTCCCACACGGAc                                                                                                                                             >  1:856052‑M1/49‑138 (MQ=255)                 aaggcaatcatggtccgctgattaaacatcgggctgcacatgggtccgTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCTCGCTCCCACACGGAc                                                                                                                                             <  2:856052‑M1/90‑1 (MQ=255)                    ccTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGa                                                                                                                              >  2:417268/1‑150 (MQ=255)                     cTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGAGGGCATGCCCGCTCCCACACGGACCCAGGTGCAGCCCGAt                                                                                                                             >  1:82017/1‑150 (MQ=255)                             cAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATc                                                                                                                     <  1:417268/150‑1 (MQ=255)                              aaGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCa                                                                                                                    >  2:248538/1‑150 (MQ=255)                               aGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAg                                                                                                                   <  2:852641/150‑1 (MQ=255)                                 caccaccacTGATCTGGCTGTTGCGAGGTCCTTGTAGGAGCGGACATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATCTCCGCTCTCACACGGACCCATGTCCAGCCCGATGTTTAATCAGCg                                                                                                                 <  2:142446/150‑1 (MQ=37)                                   ccaccacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGa                                                                                                               <  1:1203498/150‑1 (MQ=255)                                    caccacTGATCTGGCTTGTATGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATTAGCGGAc                                                                                                              <  2:827357/150‑1 (MQ=255)                                       cacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCAt                                                                                                           <  1:366179/150‑1 (MQ=255)                                         cTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCCTGTGCAGCCCGCTGGTTACTCAACCGATCATgc                                                                                                         >  2:197826/1‑149 (MQ=25)                                               tGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCt                                                                                                   >  1:805061/1‑150 (MQ=255)                                                ggCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGTCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCtt                                                                                                  <  2:103948/150‑1 (MQ=255)                                                   ttGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCacac                                                                                                                                                 <  1:879018/100‑1 (MQ=255)                                                   ttGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCacac                                                                                                                                                 >  2:879018/1‑100 (MQ=255)                                                   ttGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGaa                                                                                               <  1:20745/150‑1 (MQ=255)                                                    tgtgtgAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAAc                                                                                              >  2:882676/1‑150 (MQ=255)                                                      acatgggtccgtgtgggagcgggcatgcccgcgaagcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggcatgcccgctcccacaAGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAg                                                                                            >  1:19561‑M2/97‑150 (MQ=255)                                                       gtgAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGc                                                                                           >  1:1108605/1‑150 (MQ=255)                                                        atgggtccgTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCCTGCCCGCTCCCACCCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGCCCATGATTGCCTTGAACAGCt                                                                                          <  2:242584‑M1/141‑1 (MQ=255)                                                          aGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTcc                                                                                        <  2:805061/150‑1 (MQ=255)                                                           ggTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTACCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCg                                                                                       >  1:957128/1‑150 (MQ=255)                                                            gtccgtgtgggagcgagcatgcccgcgaagcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCtt                                                                                                  >  1:856052‑M2/91‑138 (MQ=255)                                                            gtccgtgtgggagcgagcatgcccgcgaagcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCtt                                                                                                  <  2:856052‑M2/48‑1 (MQ=255)                                                               cTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAagc                                                                                   <  2:230574/150‑1 (MQ=255)                                                                   TGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAagccagc                                                                               <  2:823367‑M1/150‑1 (MQ=255)                                                                   TGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAagccagc                                                                               <  2:516207‑M1/150‑1 (MQ=255)                                                                            GCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTcc                                                                      <  1:365716‑M1/150‑1 (MQ=255)                                                                             CATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGAGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTcca                                                                     >  2:82017‑M1/1‑150 (MQ=255)                                                                              atgcccgcgaagcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTccag                                                                    >  1:505593‑M2/73‑150 (MQ=255)                                                                              ATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTccag                                                                    <  2:252319‑M1/150‑1 (MQ=255)                                                                                GCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTccagcc                                                                  >  2:365716‑M1/1‑150 (MQ=255)                                                                                  CCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGc                                                                                                     <  1:913592‑M1/113‑1 (MQ=255)                                                                                  CCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGc                                                                                                     >  2:913592‑M1/1‑113 (MQ=255)                                                                                  CCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTccagccag                                                                <  1:1106945‑M1/150‑1 (MQ=255)                                                                                          acCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGcac                                                        >  1:598167/1‑150 (MQ=255)                                                                                                agagCCGGGGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCgg                                                  <  1:463866/150‑1 (MQ=255)                                                                                                    ggtggatagcaccggctctgccggtgttcgcgggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCCTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATaa                                              <  1:843531‑M2/100‑1 (MQ=255)                                                                                                      tggatggcaccggctctgccggtgttcgcgggcatgcccgctcccacaAGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAgc                                            <  2:19561‑M2/102‑1 (MQ=255)                                                                                                          ccATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAgccgcc                                        >  2:452147/1‑150 (MQ=255)                                                                                                            aTCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTc                                      >  1:1256938/1‑150 (MQ=255)                                                                                                               cACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCgtc                                   <  1:248538/150‑3 (MQ=255)                                                                                                                aCCGCGGTGCCCGCTTAGCGGGCATGCCCGCTCCCACACGAACCCATGTGCAGCCCGATGTTTAATCAGCGGAAGATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCAAGCCAGATCCGCACACGCGGATAAGCCGCCTCGGCg                                  >  1:129865/1‑150 (MQ=255)                                                                                                                 ccGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGa                                 <  1:252319/150‑1 (MQ=255)                                                                                                                  cgcgGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGaa                                <  2:957128/150‑1 (MQ=255)                                                                                                                         cccGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGc                         >  1:162175/1‑150 (MQ=255)                                                                                                                          ccGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCg                        <  1:823367/150‑1 (MQ=255)                                                                                                                            gCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGt                      >  1:842688/1‑150 (MQ=255)                                                                                                                              gaagcgggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTc                    <  2:457275‑M2/126‑1 (MQ=255)                                                                                                                                   gggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGAccc               >  2:700501‑M2/20‑150 (MQ=255)                                                                                                                                     gcatgccctctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGTACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCg             <  1:830698‑M2/133‑1 (MQ=255)                                                                                                                                          cccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCaaa        <  1:516207‑M2/138‑1 (MQ=255)                                                                                                                                                cccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGgcg  <  1:700501‑M2/144‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                GCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCG  >  NC_002947/2295754‑2296046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.