New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2681535	40 (0.820)	5 (0.110)	5/242	NT	9.9%	coding (58/1890 nt)	prpE	propionyl‑CoA synthetase
	?	NC_002947	= 2681560	52 (1.100)					coding (83/1890 nt)	prpE	propionyl‑CoA synthetase

ATACTCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTGATCTACGATTCGCCA  >  NC_002947/2681428‑2681708                                                                                                                                     |                                                                                                                                                     aTACTCAAGTTTCGCGCTTTAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCGCACGGTTTTCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGa                                                                                                                                     <  1:79531/150‑1 (MQ=255)     tCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCt                                                                                                                                       >  2:853582/1‑144 (MQ=255)     tCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCt                                                                                                                                       <  1:853582/144‑1 (MQ=255)     tCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCt                                                                                                                                 >  2:193358/1‑150 (MQ=255)              gCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATaa                                                                                                                        >  1:361065/1‑150 (MQ=255)                 cTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGc                                                                                                                     >  2:233806/1‑150 (MQ=255)                  ttgaaTAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGcc                                                                                                                    >  2:320267/4‑150 (MQ=255)                   tCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCg                                                                                                                   <  2:329630/150‑1 (MQ=255)                    cAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGa                                                                                                                  <  2:1157490/150‑1 (MQ=255)                           aaaaaGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTAcc                                                                                                           >  1:1283264/4‑150 (MQ=255)                            acaaGTACCGGGGTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTAccc                                                                                                          >  2:1141542/1‑150 (MQ=255)                                   ccGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTg                                                                                                   <  1:193358/150‑1 (MQ=255)                                    cGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGGCCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGTAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTgg                                                                                                  <  1:60291/150‑1 (MQ=255)                                                      aGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACGCTGCAAGATAACGc                                                                                                                     >  2:1135023/1‑113 (MQ=255)                                                      aGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACGCTGCAAGATAACGc                                                                                                                     <  1:1135023/113‑1 (MQ=255)                                                       gCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCCCTCGTTCACCAATGACCTCCTGa                                                                               >  2:673997/1‑150 (MQ=255)                                                             aGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCCTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGTCTACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCt                                                                         <  1:673997/150‑1 (MQ=255)                                                              gCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTg                                                                        <  1:1176224/150‑1 (MQ=255)                                                                  aGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTAc                                                                    <  2:1283264/150‑1 (MQ=255)                                                                          ccattccattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAg                                                                                                                            <  1:887093/86‑1 (MQ=255)                                                                          ccattccattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAg                                                                                                                            >  2:887093/1‑86 (MQ=255)                                                                          ccattccattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGcccc                                                            >  1:535723/1‑149 (MQ=255)                                                                           cattccattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGt                                                                       <  1:313518/138‑1 (MQ=255)                                                                           cattccattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGt                                                                       >  2:313518/1‑138 (MQ=255)                                                                              tccattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGac                                                        >  2:1052650/1‑150 (MQ=255)                                                                                cattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGgcc                                                                                     <  1:449902/119‑1 (MQ=255)                                                                                cattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGgcc                                                                                     >  2:449902/1‑119 (MQ=255)                                                                                cattTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGacca                                                      >  2:807174/1‑150 (MQ=255)                                                                                 attTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGAt                                                                                                                          <  2:918424/81‑1 (MQ=255)                                                                                 attTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGAt                                                                                                                          >  1:918424/1‑81 (MQ=255)                                                                                 attTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGaccac                                                     >  2:812941/1‑150 (MQ=255)                                                                                      cGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGAt                                                <  1:320267/150‑1 (MQ=255)                                                                                               cGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCAccgcccagaaagcggcagggtcggaaatggaatgggcgtagctgtgctggtagctcatgtcgttagaaacccggtacttgttgttattgaa                                                           <  2:445135‑M2/130‑92 (MQ=255)                                                                                               cGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCAccgcccagaaagcggcagggtcggaaatggaatgggcgtagctgtgctggtagctcatgtcgttagaaacccggtacttgttgttattgaa                                                           >  1:445135‑M2/1‑39 (MQ=255)                                                                                                      tGGGCGGAACAGGCCGCACACCTGGCCTGGCAccgcccagaaagcggcagggtcggaaatggaatgggcgtagctgtgctggtagctcatgtcgttagaaacccggtacttgttgttattgaagggcgaaacttgagtatggaccgctat                                <  1:204925‑M2/150‑119 (MQ=255)                                                                                                      tGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCgcggc                                <  2:361065/150‑1 (MQ=255)                                                                                                       gggCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCgcggcg                               >  1:795012/1‑150 (MQ=255)                                                                                                        ggCGGAACAGGCCGCACACCTGGCCTGGCAccgcccagaaagcggcagggtcggaaatggaatgggcgtagctgtgctggtagctcatgtcgttagaaacccggtacttgttgttattgaagggcgaaacttgagtatggaccgctatac                              <  2:888704‑M2/150‑121 (MQ=255)                                                                                                        ggCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGa                              <  2:535723/150‑1 (MQ=255)                                                                                                        ggCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGa                              <  1:1141542/150‑1 (MQ=255)                                                                                                             aaCAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAAAAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGt                         <  1:233806/150‑1 (MQ=255)                                                                                                             aaCAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGACCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGt                         <  2:909368/150‑1 (MQ=255)                                                                                                                  gCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGCCGACCGGATCGAGCAGGGCCGCGGCGAGCAGTTGgcg                    >  2:622827/1‑150 (MQ=255)                                                                                                                   ccGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGCGCAGTTTgcgt                   <  2:319690/150‑2 (MQ=255)                                                                                                                   ccGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGgcgc                   <  1:812941/150‑1 (MQ=255)                                                                                                                    cGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTgg                      <  1:1028888/146‑1 (MQ=255)                                                                                                                    cGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTgg                      >  2:1028888/1‑146 (MQ=255)                                                                                                                     gCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTg                 >  1:504034/1‑150 (MQ=255)                                                                                                                      cacaCCTGGCCGGGCACCGCAAGCCTGCCCTGACCCTGCAAGCAAACGCCGACGGTACCCAACGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTGACGTGGGTTTCGATCACCATATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTGa                <  2:467522/150‑1 (MQ=255)                                                                                                                       acacCTGGCCTGGCAccgcccagaaagcggcagggtcggaaatggaatgggcgtagctgtgctggtagctcatgtcgttagaaacccggtacttgttgttattgaagggcgaaacttgagtatggaccgctatacccacgccgccatggg               >  2:204925‑M2/1‑15 (MQ=255)                                                                                                                         acCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTa                                                                     >  2:937164/1‑94 (MQ=255)                                                                                                                         acCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTa                                                                     <  1:937164/94‑1 (MQ=255)                                                                                                                         acCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTAc                                                                    <  2:1203908/95‑1 (MQ=255)                                                                                                                         acCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTAc                                                                    >  1:1203908/1‑95 (MQ=255)                                                                                                                          cctggcctggCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTGATCTa            <  2:1170205/150‑1 (MQ=255)                                                                                                                            tggcctggcACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGAccacca                                                   <  2:383050/109‑1 (MQ=255)                                                                                                                            tggcctggcACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGAccacca                                                   >  1:383050/1‑109 (MQ=255)                                                                                                                                  ggcACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCcgcg                                  <  2:107988/120‑1 (MQ=255)                                                                                                                                  ggcACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCcgcg                                  >  1:107988/1‑120 (MQ=255)                                                                                                                                  ggcACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTGATCTACGATTCGc    >  1:1238577/1‑150 (MQ=255)                                                                                                                                    cACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTGATCTACGATTCGCCa  >  2:1010985/1‑150 (MQ=255)                                                                                                                                    cACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTGATCTACGATTCGCCa  <  1:622827/150‑1 (MQ=255)                                                                                                                                     |                                                                                                                                                     ATACTCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGAACAGGCCGCACACCTGGCCTGGCACCGCAAGCCTGCCCTGACCCTGCAAGATAACGCCGACGGTACCCACCGCTGGTTCGCGGATGGCCGCCTGAACAGCTGTTACCTGGCCCTCGACCACCAGATCGAGCAGGGCCGCGGCGAGCAGTTGGCGCTGATCTACGATTCGCCA  >  NC_002947/2681428‑2681708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.