New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4159113 =	55 (1.120)	7 (0.160)	6/224	NT	11.7%	intergenic (+17/‑192)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159201 =	56 (1.270)					intergenic (+105/‑104)	PP_3661/PP_3662	membrane protein/hypothetical protein

GGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAA  >  NC_002947/4159053‑4159346                                                                                                                                                     |                                                                                                                                                  gggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACACTGAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcaggc                                                                                                                                                  >  1:67538/1‑150 (MQ=255)   gggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcaggcag                                                                                                                                                <  2:962773/150‑1 (MQ=255)      cTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTc                                                                                                                                             >  2:584182/1‑150 (MQ=255)              gtggacggcaacgaggggggctgtgaaaaaccttgagaccgagtcggCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCACTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCaa                                                                                                                                     >  2:341374‑M1/48‑150 (MQ=255)               tggacggcaacgaggggggctgtgaaaaacctggagaccgagtcggCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAg                                                                                                                                    >  1:488448‑M1/47‑150 (MQ=255)                cccTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAgg                                                                                                                                   <  1:972856/150‑1 (MQ=255)                 ccTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGTAGGCAGCTCGGTCTCCAgga                                                                                                                                  >  1:641824/1‑149 (MQ=255)                 ccTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGt                                                                                                                                  >  2:1148482/1‑150 (MQ=255)                   tGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGttt                                                                                                                                <  1:385846/150‑1 (MQ=255)                        gTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTcac                                                                                                                           <  2:663249/150‑1 (MQ=255)                              aaGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCGCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGcccc                                                                                                                     >  1:352262/1‑150 (MQ=255)                                            aCTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTcc                                                                                                       >  1:245325/1‑150 (MQ=255)                                             cttgagaccgagctgcctgcttcgcgggtgaacccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagCCGACTCGGTCTCCAGGTTTTTCACAGCCCCCCTCGTTGCCGTCca                                                                                                      >  1:488448‑M2/105‑150 (MQ=255)                                              ttgagaccgagctgcctgcttcgcgggtgaacccgctcctacagtggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagCCGACTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCcac                                                                                                     >  2:341374‑M2/104‑150 (MQ=255)                                              tGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCcac                                                                                                     >  1:562820/1‑150 (MQ=255)                                                gagaCCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACAt                                                                                                   <  1:584182/150‑1 (MQ=255)                                                gagaCCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACAt                                                                                                   >  2:361102/1‑150 (MQ=255)                                                  gaCCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACAttt                                                                                                 >  2:1164565/1‑150 (MQ=255)                                                     cGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTtctc                                                                                              <  1:361102/150‑1 (MQ=255)                                                      gAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGGTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTcgcg                                                                                             >  1:588990/1‑150 (MQ=255)                                                      gAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGACCAGCCACCGGCGCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCg                                                                                             >  2:815396/1‑150 (MQ=38)                                                           ggCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCTCAAGCTGCCGTCCACATTTCTCGGTAtg                                                                                        <  1:815396/150‑1 (MQ=255)                                                           ggCTGCTTCGCGGGTAAACCCGCTCCTACAGGACGGTGTCGCGCAGAATACGGTTGAGCGCCGGTAGGAGCCGGTTCAGCCGCTGCTGAAGAAGCCCGGTTTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCAATATTTCGCTGTAtg                                                                                        >  1:292786/1‑150 (MQ=255)                                                            gctgctTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtgg                                                                                       >  1:1242211/1‑150 (MQ=255)                                                             CTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtggt                                                                                      <  1:77166‑M1/150‑1 (MQ=255)                                                              TGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtggtg                                                                                     >  1:1148482‑M1/1‑150 (MQ=255)                                                                CTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATggtggt                                                                                   >  1:385781‑M1/1‑150 (MQ=255)                                                                 ttcgcgggtgaacccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGgtggtg                                                                                  >  1:761490‑M2/85‑150 (MQ=255)                                                                 TTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGgtggtg                                                                                  <  1:590923‑M1/150‑1 (MQ=255)                                                                 TTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGgtggtg                                                                                  <  2:671910‑M1/150‑1 (MQ=255)                                                                    GCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAg                                                                                                                                    >  2:875077‑M1/1‑97 (MQ=255)                                                                    GCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAg                                                                                                                                    <  1:875077‑M1/97‑1 (MQ=255)                                                                      GGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCaaa                                                                             >  2:1242211‑M1/1‑150 (MQ=255)                                                                         atctcccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTAGCCCTCCACATGTCTCGGTATGGTGGTGTCAaagaa                                                                          <  1:303989‑M2/74‑1 (MQ=255)                                                                          aaaCCCGGGCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaag                                                                         <  2:161619/150‑1 (MQ=255)                                                                           aaCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaag                                                                         <  2:1058350/149‑1 (MQ=255)                                                                           aaCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaag                                                                         >  1:1058350/1‑149 (MQ=255)                                                                            aCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGa                                                                       >  2:683479/1‑150 (MQ=255)                                                                             cccGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGAt                                                                      <  2:1002532/150‑1 (MQ=255)                                                                              ccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCTCAGTTCTCGGTATGGTGGTgtcaaagaagagat                                                                     >  2:303989‑M2/72‑146 (MQ=255)                                                                              ccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggttcacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATg                                                                     >  1:1126344‑M2/72‑150 (MQ=255)                                                                              ccGCTCCTACAGGTGGGTGCTGTCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATg                                                                     <  2:613787/150‑1 (MQ=255)                                                                               cGCTCCTCCAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGt                                                                    <  2:292786/150‑1 (MQ=255)                                                                                gCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTcac                                                                                                                           >  2:1286539/1‑94 (MQ=255)                                                                                gCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTcac                                                                                                                           <  1:1286539/94‑1 (MQ=255)                                                                                    cTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTa                                                                >  2:974574/1‑149 (MQ=255)                                                                                    cTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTa                                                                <  1:974574/149‑1 (MQ=255)                                                                                    cTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAc                                                               >  1:198828/1‑150 (MQ=255)                                                                                     tACAGGTGGGTGCTGCCCTGAAGGCGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAcc                                                              >  1:442249/1‑150 (MQ=255)                                                                                     tACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAt                                                                                         <  2:769740/123‑1 (MQ=255)                                                                                     tACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAt                                                                                         >  1:769740/1‑123 (MQ=255)                                                                                         ggtgggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGca                                                          <  1:671910/150‑1 (MQ=255)                                                                                         ggggggttCGGCCCTTAATACTGCAAGGCCCCTTTAGGAGTGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGca                                                          <  2:711802/147‑1 (MQ=255)                                                                                           ggggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGcaca                                                        <  2:392120/149‑1 (MQ=255)                                                                                            gggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtggtg                                                                                     <  2:985593/120‑1 (MQ=255)                                                                                            gggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAtggtg                                                                                     >  1:985593/1‑120 (MQ=255)                                                                                            gggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAg                                                       <  1:1164565/150‑1 (MQ=255)                                                                                                  tgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGa                                                 <  2:590923/150‑1 (MQ=255)                                                                                                   gcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGAc                                                >  1:371284/1‑150 (MQ=255)                                                                                                    cccTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACt                                               <  2:198828/150‑1 (MQ=255)                                                                                                     tcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagCCGACTCGGTCTCCAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACtt                                              <  2:488448‑M2/102‑1 (MQ=255)                                                                                                     ccTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACtt                                              >  1:841641/1‑150 (MQ=255)                                                                                                     ccTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACtt                                              <  2:371284/150‑1 (MQ=255)                                                                                                         aaGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACt                                               <  1:1217751/145‑1 (MQ=255)                                                                                                         aaGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACt                                               >  2:1217751/1‑145 (MQ=255)                                                                                                            aCGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGcc                                       <  1:683479/150‑1 (MQ=255)                                                                                                            aCGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGcc                                       >  2:1147897/1‑150 (MQ=255)                                                                                                              ggCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTc                                     >  1:848900/1‑150 (MQ=255)                                                                                                                      cccTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGa                                                                       >  2:396370/1‑108 (MQ=255)                                                                                                                      cccTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGa                                                                       <  1:396370/108‑1 (MQ=255)                                                                                                                             ggAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGtc                          <  2:179645/146‑1 (MQ=255)                                                                                                                             ggAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGtc                          >  1:179645/1‑146 (MQ=255)                                                                                                                              gAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCaa                     <  2:841641/150‑1 (MQ=255)                                                                                                                               ggCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAAt                    <  2:352262/149‑1 (MQ=255)                                                                                                                                  gggTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCa                 >  1:716195/1‑150 (MQ=255)                                                                                                                                   ggTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACt                                               >  2:410980/1‑119 (MQ=255)                                                                                                                                   ggTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACt                                               <  1:410980/119‑1 (MQ=255)                                                                                                                                           cgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGc        <  2:1126344‑M2/140‑1 (MQ=255)                                                                                                                                                    gGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCaaa  >  1:1258356‑M2/2‑147 (MQ=255)                                                                                                                                                    gGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCaaa  <  2:1258356‑M2/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAA  >  NC_002947/4159053‑4159346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.