New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6009202 =	14 (0.290)	4 (0.080)	4/240	NT	35.7%	intergenic (+43/+39)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
	?	NC_002947	6009233 =	1 (0.020)					intergenic (+74/+8)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein

TTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCC  >  NC_002947/6009086‑6009348                                                                                                                                                    |                                                                                                                    ggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttagggcctcttCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAag                                                                                                                   <  2:26147‑M1/34‑1 (MQ=255)   ctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttagggcctcttCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAagag                                                                                                                 >  1:26147‑M1/115‑150 (MQ=255)                caaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttagggcctcttCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGaca                                                                                                    <  1:1161883‑M1/49‑1 (MQ=255)                             tcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttagggcctcttCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTggc                                                                                       >  2:1161883‑M1/89‑150 (MQ=255)                                                                                      gccagttggagggtgtcctttagggcctcttcgcgggcacgcccgctcccacagggaccgcgAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGa                              >  2:1161883‑M2/63‑150 (MQ=255)                                                                                                  GCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCtt                  <  1:1205529‑M1/150‑1 (MQ=255)                                                                                                  GCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCtt                  >  2:1205529‑M1/1‑150 (MQ=255)                                                                                                   tgtcctttagggcctcttcgcgggcacgcccgctcccacagggaccgcgAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTg                 <  1:1161883‑M2/101‑1 (MQ=255)                                                                                                          CCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTgg          <  2:1158271‑M1/150‑1 (MQ=255)                                                                                                          CCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTgg          <  2:818155‑M1/150‑1 (MQ=255)                                                                                                            ACAGGATTGCGCGGTCCCTGTGCGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTc        <  1:648244‑M1/150‑1 (MQ=255)                                                                                                                ctcttcgcgggcacgcccgctcccacagggaccgcgAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAg    >  1:26147‑M2/37‑150 (MQ=255)                                                                                                                  ttGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGCCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGcc  >  2:359682/1‑150 (MQ=255)                                                                                                                  cttcgcgggcacgcccgctcccacagggaccgcgAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGcc  <  2:26147‑M2/116‑1 (MQ=255)                                                                                                                                                    |                                                                                                                    TTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCC  >  NC_002947/6009086‑6009348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.