| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 537,582 | C→G | 7.4% | intergenic (+109/‑44) | PP_mr07 → / → rpoB | P26 ncRNA/DNA‑directed RNA polymerase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 537,582 | 0 | C | G | 7.4% | 193.7 / 4.7 | 64 | intergenic (+109/‑44) | PP_mr07/rpoB | P26 ncRNA/DNA‑directed RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): ref base C (35/24); new base G (2/3); total (37/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTGAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTATC > NC_002947/537433‑537731 | gTTGAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCccgc > 2:1039992/1‑150 (MQ=255) aGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGGagcagc < 2:171390/150‑1 (MQ=255) aGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGc < 1:1143075/150‑1 (MQ=255) aGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGc < 2:911289/150‑1 (MQ=255) cTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTTTGGCTTCTCCCGGCGGGAGCAGCCag > 1:256425/1‑149 (MQ=255) tGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCaaa < 1:1099805/150‑1 (MQ=255) tggtggCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGGCGGTCAGGCCGGTCCCGCTAACGCGACCCGAGATACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAg < 1:862886/150‑1 (MQ=255) gCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACCCTTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGAc > 2:169696/1‑150 (MQ=255) cTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGGAGCAGcc > 1:713993/1‑134 (MQ=255) cTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTTCTCCCGGCGGGAGCAGcc < 2:713993/134‑1 (MQ=255) ttATGCCACCGGCCTTTTTCCGTTATTGGTGGCTGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCACCGGGAGAAGCCAAACAAGCAGGTGAcga > 1:162894/1‑148 (MQ=255) ttATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCaa > 1:1217476/1‑135 (MQ=255) ttATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCaa < 2:1217476/135‑1 (MQ=255) tATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCaa > 1:312723/1‑150 (MQ=255) cACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTgg > 1:751417/1‑150 (MQ=255) cACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTgg > 2:1022420/1‑150 (MQ=255) aCCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTggg > 1:859501/1‑150 (MQ=255) aCCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTggg > 1:219213/1‑150 (MQ=255) aCCGGCCAGTTTCCGGGATGGGTGGCCGGTCAGGCCCGGCCCGATAACGAGCTGCAAGACACCCAAGCGGGTGGCGCAAACCAAGGGGATTGCACGACTTGTTTGCGTCGCTAGCCGTGAGAAAACAAACAAGCAGGTGATCAACCAggg > 2:466353/1‑150 (MQ=255) ccGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGCGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTgggg < 2:859501/150‑1 (MQ=255) ccGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTgggg < 2:219213/150‑1 (MQ=255) ccTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACg > 1:145542/1‑150 (MQ=255) tttttCGGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTTCAAGACACCCATGCGGGTGGCGCAAACCAAGGGGTTTGCACGATGTGCTTGCTGCTGCCACCGGGAGAAGCAAAACAAGCAGGTAACCAACGTTGGGAACGCt > 2:145306/1‑150 (MQ=255) tttttCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCACACGAGTGGGTGACCAAGCTGGGGAACGCt > 1:642910/1‑150 (MQ=255) tCCGTTATTGGTGTCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATg < 1:582329/150‑1 (MQ=255) tCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATg < 2:104053/150‑1 (MQ=255) tCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATg > 1:683455/1‑150 (MQ=255) gTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCt > 1:671693/1‑150 (MQ=255) aTTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTAc > 1:761162/1‑150 (MQ=255) ggCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATac < 2:671693/150‑1 (MQ=255) gCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATaca > 2:385295/1‑150 (MQ=255) gTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTga < 2:751417/150‑1 (MQ=255) gCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGaaaa > 1:892460/1‑150 (MQ=255) gCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGaaaa > 1:736979/1‑150 (MQ=255) gTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTa < 2:382486/129‑1 (MQ=255) gTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTa > 1:382486/1‑129 (MQ=255) cGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGGACGCTGATGGCTTACTCATACACTGAGCAAAAACGTATc > 2:590608/1‑150 (MQ=255) tAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGc < 1:1222749/150‑1 (MQ=255) aGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGa > 2:54948/1‑150 (MQ=255) tGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACtt > 1:604930/1‑150 (MQ=255) gCAAGACACCCATGTGGGTGGCGCAAACCAAAGGGTTTGCACGATTTTCTGACTGCTCCCGGCGGGAGAAGCCAAACAAGCAGGTGACCAAGCGGGGCAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACttt < 1:466353/150‑1 (MQ=255) cAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTa > 2:1095178/1‑150 (MQ=255) aaGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGa > 1:128882/1‑104 (MQ=255) aaGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGa < 2:128882/104‑1 (MQ=255) aaGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAg > 1:1238220/1‑150 (MQ=255) ccATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAAc > 2:574396/1‑124 (MQ=255) ccATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAAc < 1:574396/124‑1 (MQ=255) aTGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGcc > 1:169688/1‑150 (MQ=255) tgtgGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCg < 1:1022420/150‑1 (MQ=255) gtggCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGt < 2:312723/150‑1 (MQ=255) tggCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTc < 1:891359/150‑1 (MQ=255) gcgcAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATc < 1:428835/118‑1 (MQ=255) gcgcAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATc > 2:428835/1‑118 (MQ=255) gcAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATgg > 1:458532/1‑150 (MQ=255) ccAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGAAGGACGTCAtagcatta > 2:913380/1‑143 (MQ=255) cAAGGGGTTTGCACGCTTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGc < 2:892460/150‑1 (MQ=255) cACTATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTg < 1:145306/150‑1 (MQ=255) cACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTg < 2:604930/150‑1 (MQ=255) cACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTg < 1:913380/150‑1 (MQ=255) aCGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTgg > 2:824331/1‑150 (MQ=255) gATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGcc > 1:14438/1‑150 (MQ=255) gATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTAATGGATGTGCCTTACCTCCTGGcc > 2:642272/1‑150 (MQ=255) aTTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCa > 1:120167/1‑150 (MQ=255) tGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGTGAAAAAACGTATCCGCAAGGTCTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGc < 2:145542/150‑1 (MQ=255) gctgctCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTg > 1:577055/1‑150 (MQ=255) ccgccgGGAGCAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGt > 2:1278354/1‑150 (MQ=255) ccgccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGt > 1:918118/1‑77 (MQ=255) ccgccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGt < 2:918118/77‑1 (MQ=255) ccgccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAg > 1:1258470/1‑140 (MQ=255) ccgacgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAg < 2:1258470/140‑1 (MQ=255) cgccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTa > 2:672802/1‑150 (MQ=255) ccgGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTATc < 2:14438/150‑1 (MQ=255) | GTTGAGCGAAAGGCTGATGGCTGGTGGCTTATGCCACCGGCCTTTTTCCGTTATTGGTGGCCGGTCAGGCCGGTCCCGATAACGAGCTGCAAGACACCCATGTGGGTGGCGCAAACCAAGGGGTTTGCACGATTTTCTGGCTGCTCCCGCCGGGAGAAGCCAAACAAGCAGGTGACCAAGCTGGGGAACGCTGATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTACCTCCTGGCCATCCAGCTGGATTCGTATC > NC_002947/537433‑537731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |