Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 648,882 | A→G | 7.1% | C267R (TGC→CGC) | accC ← | acetyl‑CoA carboxylase biotin carboxylase subunit |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 648,882 | 0 | A | G | 7.1% | 163.6 / 2.4 | 56 | C267R (TGC→CGC) | accC | acetyl‑CoA carboxylase biotin carboxylase subunit |
Reads supporting (aligned to +/- strand): ref base A (26/26); new base G (2/2); total (28/28) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 |
AGCATCTCCTTGACGATGTCGATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATGGCGTTGCCCTGGCCGTCGGACAGTA > NC_002947/648734‑649031 | aGCATCTCCTTGACGATGTCGATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTTTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCAc < 1:1124019/150‑1 (MQ=255) aGCATCTCCTTGACGATGTCGATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCAc < 1:1143049/150‑1 (MQ=255) gCATCTCCTTGACGATGTAGATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACg > 1:682124/1‑150 (MQ=255) tcCTTGACGATGTCGATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCg > 1:150686/1‑150 (MQ=255) aTGTCGATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAgcgc < 2:1071028/150‑1 (MQ=255) tGTCGATACCAGTGACCATCTCCGACACCGGGCGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCt > 2:1096213/1‑150 (MQ=255) gATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGaa > 2:280109/1‑150 (MQ=255) gATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGaa > 1:838744/1‑150 (MQ=255) cAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACtt > 1:216178/1‑150 (MQ=255) aGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTc > 2:1054147/1‑150 (MQ=255) aCCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCt > 1:1257555/1‑136 (MQ=255) aCCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCt < 2:1257555/136‑1 (MQ=255) ctcCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCa < 1:945184/126‑1 (MQ=255) ctcCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCa > 2:945184/1‑126 (MQ=255) cGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCttt > 1:629841/1‑150 (MQ=255) ccGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCAt < 2:216178/150‑1 (MQ=255) tGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGCCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATg < 1:326655/150‑1 (MQ=255) tCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGccc > 2:92950/1‑150 (MQ=255) tCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGccc > 2:822497/1‑150 (MQ=255) tCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGccc > 2:587269/1‑150 (MQ=255) aaCCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCgg > 2:1186597/1‑150 (MQ=255) aCGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCttt > 1:1201096/1‑128 (MQ=255) aCGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCttt < 2:1201096/128‑1 (MQ=255) gcgGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGc < 1:1126439/150‑1 (MQ=255) gtTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCttcttc < 1:452236/150‑1 (MQ=255) aTCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCGTGCATCGagat < 2:1065908/88‑4 (MQ=255) aTCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCGTGCATCGagat > 1:1065908/1‑85 (MQ=255) aTCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGt < 1:280109/150‑1 (MQ=255) tctcGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTc < 2:169713/103‑1 (MQ=255) tctcGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTc > 1:169713/1‑103 (MQ=255) gTAGAAGCGGCCGTTTTCGTACAGGAACTCGACCGTATGCCCAACACGGTAGCGAATCTTGAGGCACGGGACGATGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTg > 1:349483/1‑150 (MQ=255) gAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACg < 2:838744/150‑1 (MQ=255) cGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGgcgc < 1:1096213/150‑1 (MQ=255) ccGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGc < 2:682124/150‑1 (MQ=255) gTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTg > 2:389767/1‑129 (MQ=255) gTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTg < 1:389767/129‑1 (MQ=255) tACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCg > 2:432017/1‑100 (MQ=255) tACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCg < 1:432017/100‑1 (MQ=255) tACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAg > 2:255347/1‑150 (MQ=255) aCAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGt > 1:62180/1‑150 (MQ=255) gAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTcgcg > 2:448285/1‑150 (MQ=255) aaCTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCgg < 1:150983/150‑1 (MQ=255) tCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGt > 1:248026/1‑99 (MQ=255) tCGAAAGTACCGGCACCACGGTAGCCCATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGt < 2:248026/99‑1 (MQ=255) ccGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGa > 2:1204474/1‑150 (MQ=255) gCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATg < 2:134506/150‑1 (MQ=255) ccGATCTCGATGCACGCATCGACGCAGCGCTTGAACCCGTCCTGACGTGCTTTCTCATCGATGCCCGGGGCAGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATGGCGTTGCCCTgg < 1:85510/150‑1 (MQ=255) tctcGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGccc > 2:1281272/1‑62 (MQ=255) tctcGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGccc < 1:1281272/62‑1 (MQ=255) tctcGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGc < 1:724734/73‑1 (MQ=255) tctcGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGc > 2:724734/1‑73 (MQ=255) gtcGATGCGTGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTcg < 2:170464/114‑1 (MQ=255) gtcGATGCGTGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTcg > 1:170464/2‑115 (MQ=255) ctcGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATGGCGTTGCCCTGGCCGTc < 1:448285/150‑1 (MQ=255) ctcGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATGGCGTTGCCCTGGCCGTc < 1:92950/150‑1 (MQ=255) gCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATGGCGTTGCCCTGGCCGTCGGACAg < 1:822497/150‑1 (MQ=255) aCGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATGGCGTTGCCCTGGCCGTCGGACAGTa > 1:1270312/1‑150 (MQ=255) | AGCATCTCCTTGACGATGTCGATACCAGTGACCATCTCCGACACCGGGTGCTCAACCTGCACGCGGGTGTTCATCTCGATGAAGTAGAAGCGGCCGTTTTCGTACAGGAACTCGAAAGTACCGGCACCACGGTAGCCGATCTCGATGCACGCATCGACGCAGCGCTTGAACACTTCCTGACGGGCTTTCTCATCGATGCCCGGGGCTGGTGCTTCTTCCAGTACTTTCTGGTGACGGCGCTGCAGCGAGCAGTCGCGGTCGCCCAGGTGAATGGCGTTGCCCTGGCCGTCGGACAGTA > NC_002947/648734‑649031 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |