| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,642,306 | G→A | 8.0% | intergenic (‑92/+60) | PP_1442 ← / ← lon‑I | hypothetical protein/DNA‑binding ATP‑dependent protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,642,306 | 0 | G | A | 8.0% | 219.8 / 7.1 | 75 | intergenic (‑92/+60) | PP_1442/lon‑I | hypothetical protein/DNA‑binding ATP‑dependent protease |
| Reads supporting (aligned to +/- strand): ref base G (37/32); new base A (4/2); total (41/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 | |||||||||||
GCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGA > NC_002947/1642161‑1642451 | gcAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTg > 1:414292/1‑150 (MQ=255) aaGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCa > 2:299336/1‑150 (MQ=255) aGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAgggg > 1:142660/1‑150 (MQ=255) aaaGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTa > 2:176958/1‑150 (MQ=255) aaGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAg < 2:142660/150‑1 (MQ=255) aaGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAg < 2:414292/150‑1 (MQ=255) aGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGc > 2:469575/1‑150 (MQ=255) cGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCg > 1:231505/1‑150 (MQ=255) aaGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTg > 1:714069/1‑150 (MQ=255) aaGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTg > 1:714106/1‑150 (MQ=255) aGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGc > 1:890352/1‑150 (MQ=255) aGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTg > 2:528808/1‑150 (MQ=255) ggggAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAg < 2:650140/127‑1 (MQ=255) ggggAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAg > 1:650140/1‑127 (MQ=255) ggggAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGc < 1:398421/150‑1 (MQ=255) aGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGc > 1:1258341/1‑150 (MQ=255) gCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGt < 1:1081711/133‑1 (MQ=255) gCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGt > 2:1081711/1‑133 (MQ=255) cAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCACGGGTACGC‑TACCCCTGCAGGCGCGGGCttactc < 2:323547/150‑5 (MQ=37) gACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCcgc > 1:1230427/1‑150 (MQ=255) aCGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCcgcg > 2:1086359/1‑150 (MQ=255) gagGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAggg > 1:165231/1‑150 (MQ=255) agGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTg > 2:240897/1‑122 (MQ=255) agGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTg > 2:240869/1‑122 (MQ=255) agGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTg < 1:240897/122‑1 (MQ=255) agGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTg < 1:240869/122‑1 (MQ=255) tCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGt < 1:469575/150‑1 (MQ=255) tggtggCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCa < 2:1258341/150‑1 (MQ=255) ggtggCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAg < 2:1230427/150‑1 (MQ=255) gtggCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCACCTGCACGGGTACGC‑TACCCCTGCAGGCGCGGGCTTACTCGCGaaag > 2:584190/1‑136 (MQ=21) gtggCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCACCTGCACGGGTA‑CGCTACCCCTGCAGGCGCGGGCTTACTCGCGaaag < 1:584190/138‑3 (MQ=21) cTCCGAAGGCTGGCGATGGCCTGAGGATACCGGATGATCGAGGCAATTTGTGCTGCATGTGACGGTCCTTTCGGATGTAATCCCGCGCCTGCAGGGGGAGCG‑GACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAg > 2:787050/1‑150 (MQ=255) cTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAg < 2:165231/150‑1 (MQ=255) tCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCgg > 2:412747/1‑118 (MQ=255) tCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCgg < 1:412747/118‑1 (MQ=255) ccGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCACGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGTGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGaa < 2:1110681/150‑1 (MQ=255) cGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAAc > 1:769559/1‑150 (MQ=255) gAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACa < 1:1060091/150‑1 (MQ=255) gAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACa > 2:332688/1‑150 (MQ=255) aaGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAg < 1:176958/150‑1 (MQ=255) ggCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCa < 2:312782/150‑1 (MQ=255) tGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAgg > 2:983197/1‑136 (MQ=255) tGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAgg < 1:983197/136‑1 (MQ=255) ggCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCaa > 1:238217/1‑149 (MQ=255) aCCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAgc < 2:890352/150‑1 (MQ=255) ccGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAgcgc > 2:647779/1‑150 (MQ=255) ccGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAgcgc < 1:299336/150‑1 (MQ=255) atgatCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTg < 1:647779/150‑1 (MQ=255) aGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAAt < 1:332688/150‑1 (MQ=255) ggAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATg > 2:1126338/1‑150 (MQ=255) aTTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTc > 2:237858/1‑117 (MQ=255) aTTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTc < 1:237858/117‑1 (MQ=255) ttGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGt < 1:1086359/150‑1 (MQ=255) ttGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGt < 1:1126338/150‑1 (MQ=255) tgtgCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTc > 2:533013/1‑150 (MQ=255) tgcCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGcc > 2:832296/1‑150 (MQ=255) tgtgCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAACACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTcg > 1:921317/1‑150 (MQ=255) gCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAg < 1:565120/140‑1 (MQ=255) gCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAg > 2:565120/1‑140 (MQ=255) caccgcccTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCgcgc > 1:466052/7‑150 (MQ=255) cGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAg < 1:528808/150‑1 (MQ=255) ggTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACt < 2:14036/132‑1 (MQ=255) ggTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACt > 1:14036/1‑132 (MQ=255) ggTCCTTTAGAGTGTAAGCGCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAgg < 2:714106/150‑1 (MQ=255) ggTCCCATCGAGATTATGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAgg < 2:714069/150‑1 (MQ=255) gccctcttCGCGGGCAAGCCCGCACCTGCACGGGTA‑CGCTACCCCTGCAGGCGCGGGCTTACTCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAgg > 1:1021336/7‑150 (MQ=17) ccctcttCGCGGGCAAGCCCGCACCTGCACGGGTACGC‑TACCCCTGCAGGCGCGGGCTTACTCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCCAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGt > 1:68310/6‑150 (MQ=18) tCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTa > 1:207110/1‑150 (MQ=255) ttCGCGGGCAAGCCCGCACCTGCACGGGTA‑CGCTACCCCTGCAGGCGCGGGCTTACTCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTcc < 2:1021336/150‑1 (MQ=18) aaGCCCGCGCCTGCAGGGGTAGCG‑TACGCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGACACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGACTTCGGGCAGGTAGTGCGGCAGtttt > 2:631603/1‑148 (MQ=255) cccGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAAt > 2:64847/1‑109 (MQ=255) cccGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAAt < 1:64847/109‑1 (MQ=255) ccGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCAc > 1:979745/1‑85 (MQ=255) ccGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCAc < 2:979745/85‑1 (MQ=255) ccGCACCTGCACGGGTA‑CGCTACCCCTGCAGGCGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGa > 2:1051419/1‑150 (MQ=38) | GCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGCCGGTCCTTTCGCGAGTAAGCCCGCGCCTGCAGGGGTAGCG‑TACCCGTGCAGGTGCGGGCTTGCCCGCGAAGAGGGCGGTGCAGGCTAGAACAGCACTTTCGCCACGTCGGCAAAGCGCTTGGCGAAATGCACTGTCAGGCCTTCGCGCAGGTAGTCCGGCAGTTCTTCGA > NC_002947/1642161‑1642451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |