| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,941,651 | C→T | 6.4% | V142M (GTG→ATG) | PP_3477 ← | type II secretion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,941,651 | 0 | C | T | 6.4% | 182.8 / 2.5 | 63 | V142M (GTG→ATG) | PP_3477 | type II secretion protein |
| Reads supporting (aligned to +/- strand): ref base C (28/30); new base T (2/2); total (30/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-01 | |||||||||||
GCGGCATGGCGATGGTCATCAGCGTGGCGATGATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCTTGGCACTGC > NC_002947/3941505‑3941800 | gcgGCATGGCGATGGTCATCAGCGTGGCGATGATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTc < 1:483590/150‑1 (MQ=255)gcgGCATGGCGATGGTCATCAGCGTGGCGATGATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTc < 1:811175/150‑1 (MQ=255) gCATGGCGATGGTCATCAGCGTGGCGATGATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGaa > 2:797651/1‑150 (MQ=255) cGATGGTCATCAGCGTGGCGATGATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTc > 1:1084838/1‑150 (MQ=255) atGGCGATCATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTcgcgcg > 2:585174/2‑150 (MQ=255) tGGCGATGATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCgg < 2:1143795/150‑1 (MQ=255) gatgatCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTg < 2:1084838/150‑1 (MQ=255) atCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGt > 1:825637/1‑147 (MQ=255) atCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGt < 2:825637/147‑1 (MQ=255) atCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCgg < 2:22138/150‑1 (MQ=255) tCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCggg > 2:485046/1‑150 (MQ=255) tCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACAAGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCggg < 1:742507/150‑1 (MQ=255) tCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTACGATTCAGCTCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGGCTTTCACACGTGCTCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCggg > 1:874207/1‑150 (MQ=255) tCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGgctgct > 1:664183/1‑150 (MQ=255) caccacCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGctgctg < 2:27851/150‑1 (MQ=255) accaccAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCgg < 1:873438/141‑1 (MQ=255) accaccAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCgg > 2:873438/1‑141 (MQ=255) ccaccaGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTCCCGGCTTTTGCCGCGGCTCCTGGATTACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTc < 1:797651/150‑1 (MQ=255) accaGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGt < 1:717777/150‑1 (MQ=255) cagcagTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACATGTCGAACACGTCTTCGCCCTCGCGCggg < 1:240667/129‑1 (MQ=255) cagcagTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACATGTCGAACACGTCTTCGCCCTCGCGCggg < 1:241076/129‑1 (MQ=255) cagcagTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACATGTCGAACACGTCTTCGCCCTCGCGCggg > 2:240667/1‑129 (MQ=255) cagcagTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACATGTCGAACACGTCTTCGCCCTCGCGCggg > 2:241076/1‑129 (MQ=255) gcagTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGCCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGgc > 1:2350/1‑150 (MQ=255) gATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCgggg > 1:445371/1‑129 (MQ=255) gATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCgggg < 2:445371/129‑1 (MQ=255) gATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAgg > 2:190851/1‑150 (MQ=255) ggTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAg > 2:723038/1‑150 (MQ=255) aaGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAgccgc > 2:669815/1‑150 (MQ=255) gCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCt < 2:664183/150‑1 (MQ=255) cTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGCCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGTGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTc < 2:2350/150‑1 (MQ=255) ctgcGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAgc < 1:697283/138‑1 (MQ=255) ctgcGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAgc > 2:697283/1‑138 (MQ=255) tgcGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGgcgc > 1:1187770/1‑125 (MQ=255) tgcGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGgcgc < 2:1187770/125‑1 (MQ=255) gTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGCAAAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATc < 1:976918/150‑1 (MQ=255) tCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGccac > 2:665312/1‑150 (MQ=255) tCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGccac > 2:203410/1‑150 (MQ=255) aCCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGccacca > 2:505120/1‑150 (MQ=255) ccATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCTGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAg < 1:1038800/150‑1 (MQ=255) aTTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCg < 1:585174/150‑1 (MQ=255) tAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGtt > 2:1248823/1‑74 (MQ=255) tAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGtt < 1:1248823/74‑1 (MQ=255) tAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGc < 1:485046/150‑1 (MQ=255) aaGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAGTACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCg < 1:1136061/150‑1 (MQ=255) ggATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGa > 2:236216/1‑150 (MQ=255) atatTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATa < 1:723038/150‑1 (MQ=255) atTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATAcg > 2:341380/1‑150 (MQ=255) ttGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATAcgc > 2:1177610/1‑150 (MQ=255) ttCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGccacca > 1:32430/1‑127 (MQ=255) ttCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGccacca < 2:32430/127‑1 (MQ=255) aGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCAACAGCGGGTCGAGCAGGATACGCCGGAgg > 2:1037352/1‑150 (MQ=255) gCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGaa < 1:505120/150‑1 (MQ=255) gCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGGCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGGTACGCCGCCGGaa > 2:1265424/1‑150 (MQ=255) tttGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTa > 1:396368/1‑150 (MQ=255) tttGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTa < 2:419972/150‑1 (MQ=255) gCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGaa < 1:1177610/150‑1 (MQ=255) gCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCACCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGaa < 2:827620/150‑1 (MQ=255) aagagCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACtt > 1:44405/5‑150 (MQ=255) ccTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGcc < 1:1265424/150‑1 (MQ=255) cTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGccc > 1:256958/1‑150 (MQ=255) ggAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCtt < 1:669815/150‑1 (MQ=255) aaTACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCTTgg < 1:236216/150‑1 (MQ=255) acGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCTTGGCACTg > 2:1079828/1‑150 (MQ=255) cGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGTGGCTGCGGTCGTCGGCGCGCAGGCGCAAGCCTAGTGCTTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCTTGGCACTgc < 1:665312/150‑1 (MQ=255) cGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCTTg < 1:715252/143‑1 (MQ=255) cGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCTTg > 2:715252/1‑143 (MQ=255) | GCGGCATGGCGATGGTCATCAGCGTGGCGATGATCGCCATCACCACCAGCAGTTCGATCAGGGTGAAGCCTTTGCTGCGTTTCATGGCTGTCACCATTGCCCGTAAGGGATATTGTTCAGGCCTTTGCCGCGGGCCCTGGAATACACGTCGAACACGTCTTCGCCCTCGCGCGGGTTGTCGGGGCTGCTGTCGTAGGCGCGCAGGCCCCAGCCGCCTTCGTCTTCATCCTTTGCCGCCACCAGCGGGTCGTGCGGGATACGCCGCAGGAAGTAGAACTTGGCGCCCTTGGCACTGC > NC_002947/3941505‑3941800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |