| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,610,345 | C→G | 8.6% | A262A (GCC→GCG) | PP_4081 → | type IV/VI secretion system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,610,345 | 0 | C | G | 8.6% | 176.2 / 8.4 | 58 | A262A (GCC→GCG) | PP_4081 | type IV/VI secretion system protein |
| Reads supporting (aligned to +/- strand): ref base C (24/29); new base G (3/2); total (27/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.89e-01 | |||||||||||
TGATTCACCAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGTTTTTGCCT > NC_002947/4610197‑4610487 | tGATTCACCAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCcgccatcgcca > 1:882972/1‑150 (MQ=255) aCCAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCATAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCgg > 2:744960/1‑150 (MQ=255) aCCAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCgg > 1:1056298/1‑150 (MQ=255) cgaaCTTCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGt > 2:857029/3‑150 (MQ=255) ccAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGt < 2:899357/150‑1 (MQ=255) ccAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGt > 2:223063/1‑150 (MQ=255) cAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTg < 1:30418/150‑1 (MQ=255) cAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAACAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTg > 1:615501/1‑150 (MQ=255) aaCTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCCACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTga < 1:476538/150‑2 (MQ=255) aCGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACg < 1:215281/150‑1 (MQ=255) tGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCGCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGCGGAGCCCGTTGGTCACC‑ACCGCCATCGCCATGGCGGTGGCCTACGCGATTTCCAGCCAACGcc > 2:270998/1‑150 (MQ=18) cccACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTg > 2:949801/1‑150 (MQ=255) ccACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGa < 2:1079706/150‑1 (MQ=255) ccACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGa < 1:949801/150‑1 (MQ=255) ccGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATcac < 2:882604/148‑1 (MQ=255) ccGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATcac > 1:882604/1‑148 (MQ=255) ccGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACaa > 2:742875/1‑150 (MQ=255) ccGAAGAAGTCTCAGACCCTAACACCAACTTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACaa < 2:615501/150‑1 (MQ=18) gaagTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGCTTTACAGCTACCGCCTGCACCTGATCACAACCGAg < 1:869169/150‑1 (MQ=255) gaagTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAg < 1:930231/150‑1 (MQ=255) tGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTg < 1:178957/150‑1 (MQ=255) cGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGa < 2:1056298/150‑1 (MQ=255) ccTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGc < 1:842479/150‑1 (MQ=255) cTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCt > 2:233617/1‑150 (MQ=255) cTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCAGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCt > 2:175464/1‑150 (MQ=255) cacCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGaa < 2:893707/150‑1 (MQ=255) acCAACGTCGCCCCCAGAAACTTGAGCTTGGGCCTGATATGGCCGTGGTGGAGCCCGTTCGTCATCGATCGGTGT‑GCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAAc < 1:223063/150‑1 (MQ=18) aaCGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTg > 1:777023/1‑111 (MQ=255) aaCGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTg < 2:777023/111‑1 (MQ=255) gCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTg < 1:382852/150‑1 (MQ=255) ccccAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTgca > 1:220601/1‑150 (MQ=255) ccAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGa < 2:1049821/127‑1 (MQ=255) ccAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGa > 1:1049821/1‑127 (MQ=255) ccAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTgcagc < 2:1216124/150‑1 (MQ=255) cAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTgcagca < 1:253642/150‑1 (MQ=255) cAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTgcagca > 2:1088061/1‑150 (MQ=255) cATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCgt < 1:857029/150‑1 (MQ=255) ccGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTcact < 2:882972/150‑2 (MQ=255) gATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTgca < 2:966557/126‑1 (MQ=255) gATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTgca > 1:966557/1‑126 (MQ=255) tggAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCaa > 2:108925/1‑150 (MQ=255) tggAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCaa < 1:175464/150‑1 (MQ=255) tggAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCaa < 2:801005/150‑1 (MQ=40) gAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGcaccac < 2:1102109/139‑1 (MQ=255) gAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGcaccac > 1:1102109/1‑139 (MQ=255) cGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTc < 1:824589/150‑1 (MQ=40) cGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTc > 1:194236/1‑150 (MQ=39) gTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTcg > 1:239973/1‑150 (MQ=40) ttGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTcgc > 1:470105/1‑150 (MQ=38) ggTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCCCTAAGATCAACGAATTCGCGa > 2:614162/1‑150 (MQ=255) tCATC‑TCCGCCATCGCCATGGCGGTGGCNTACGGGATTTACAGCNANCNCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAgg > 1:880331/1‑150 (MQ=37) aTC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGtt > 2:143137/1‑150 (MQ=35) gccaccGCCATGGCGATGGCGGAGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCaa > 1:10379/5‑135 (MQ=11) gccaccGCCATGGCGATGGCGGAGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCaa < 2:10379/131‑1 (MQ=11) ccaccGCCATGGCGATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCgtgt < 1:242200/111‑1 (MQ=255) ccaccGCCATGGCGATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCgtgt > 2:242200/4‑114 (MQ=255) tcCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGttttt < 1:744960/150‑1 (MQ=32) cccGCCATCGCCATGGCGGTGGCCTACCGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTTAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCAGCACTGAGTTCAACGAATTCGCGAGGttttt < 1:270998/149‑1 (MQ=12) ccGCCATGGCGATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAATTCAACGAATTCGCGAGGTTTTTg > 2:1204422/1‑150 (MQ=255) cgccatcgccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGTTTTTGc < 2:470105/150‑1 (MQ=32) cgccatcgccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGTTTTTGc > 2:250836/1‑150 (MQ=32) cgccatcgccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGTTTTTGc > 2:1003325/1‑150 (MQ=32) ccatcgccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGTTTTTGCCt > 1:240814/1‑150 (MQ=32) gccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTcg > 2:730065/1‑131 (MQ=33) gccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTcg < 1:730065/131‑1 (MQ=33) ccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTcgc > 2:724903/1‑131 (MQ=33) ccatGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTcgc < 1:724903/131‑1 (MQ=32) | TGATTCACCAACTGCACGGGATCATCCGCGAACTGCGCGGCCCCACCCCCGAAGAAGTCTGCGACCCCTACACCAACGTCGCCCCCAGAAACTTCCGCATGAGCCGGATATGGCCGTGGTGGAGCCCGTTGGTCATC‑TCCGCCATCGCCATGGCGGTGGCCTACGGGATTTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAGCCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGTTTTTGCCT > NC_002947/4610197‑4610487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |