| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,642,656 | C→T | 7.2% | Q185* (CAG→TAG) ‡ | PP_4107 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,642,656 | 0 | C | T | 7.2% | 201.6 / 4.1 | 69 | Q185* (CAG→TAG) ‡ | PP_4107 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (32/32); new base T (2/3); total (34/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
CATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTC > NC_002947/4642507‑4642804 | cATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGccc > 2:1201918/1‑150 (MQ=255) aTTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCa > 1:1178574/1‑150 (MQ=255) ccTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCGCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGct > 1:549237/1‑150 (MQ=255) ggTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCGctgta < 2:135465/150‑3 (MQ=255) cAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCGctgtcgaaa < 1:1014100/150‑7 (MQ=255) cAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAg < 2:858861/150‑1 (MQ=255) aaGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGc > 1:18972/1‑150 (MQ=255) ggACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGtt < 2:738145/150‑1 (MQ=255) gTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCaa > 1:1034499/1‑150 (MQ=255) gTCGCCTTTTTCTACCGCAAGCGAACCTGGCCCCGGTCGACCTGCATCGAGTTGTTCAGAGAAGTAG‑GACGATGTGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCaa < 1:542639/150‑1 (MQ=255) gCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctga < 2:954355/127‑1 (MQ=255) gCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctga > 1:954355/1‑127 (MQ=255) ttttCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCgtgt < 2:142986/150‑1 (MQ=255) tttCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCaa > 2:162236/1‑142 (MQ=255) tttCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCaa < 1:162236/142‑1 (MQ=255) aGGGCACCTGGCCCGGGGCGGCCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAgg < 1:1261854/150‑1 (MQ=255) gggCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGc > 1:404421/1‑150 (MQ=255) aCCTGGCCCGGGGCGATCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTgg > 1:70242/1‑150 (MQ=255) cccGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGaa > 1:592512/1‑150 (MQ=255) ccTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTgg < 2:18972/150‑1 (MQ=255) cTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCt > 1:1054841/1‑147 (MQ=255) cTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCt < 2:1054841/147‑1 (MQ=255) cTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTggg > 1:217279/1‑150 (MQ=255) cTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTggg > 2:793355/1‑150 (MQ=255) cTGCATCGAGTGGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTggg > 1:142918/1‑150 (MQ=255) gAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCa > 1:1097603/1‑74 (MQ=255) gAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCa < 2:1097603/74‑1 (MQ=255) gttgttCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGtt < 1:793355/150‑1 (MQ=255) gttCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCa < 2:1034499/150‑1 (MQ=255) ttCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCGctgtc > 2:1239576/1‑75 (MQ=255) ttCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCGctgtc < 1:1239576/77‑3 (MQ=255) ttCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCAt > 2:341894/1‑150 (MQ=255) tCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATa < 1:1280478/150‑1 (MQ=255) aGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGc > 2:438675/1‑106 (MQ=255) aGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGc < 1:438675/106‑1 (MQ=255) aGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGc < 2:70242/150‑1 (MQ=255) aGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGc > 2:747554/1‑150 (MQ=255) aagaagTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCCCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGa < 1:288019/118‑1 (MQ=255) aagaagTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGa > 2:288019/1‑118 (MQ=255) agaagTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGaa < 2:404421/150‑1 (MQ=255) gaagTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGGCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAAc > 1:1103831/1‑150 (MQ=255) gtggtgCCG‑GTGTGCAGCCCGCAGCTGCCGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGc > 1:482484/1‑150 (MQ=255) tgCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATa < 2:604386/135‑1 (MQ=255) tgCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATa > 1:604386/1‑135 (MQ=255) cG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACg > 2:1193406/1‑150 (MQ=255) g‑gTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACgg > 2:1203304/1‑150 (MQ=255) g‑gTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACgg < 2:1178574/150‑1 (MQ=255) g‑gTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACgg > 1:673530/1‑150 (MQ=255) gtgtGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGAGAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACggg > 2:738496/1‑150 (MQ=255) aGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCgcgc < 2:549237/150‑1 (MQ=255) cccGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCCGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCtt > 2:1150769/1‑150 (MQ=255) ccGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCACAACAGCTACCACGGGCCGCGCTTc < 1:747554/150‑1 (MQ=255) cGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCtt < 1:62594/148‑1 (MQ=255) cGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCtt > 2:62594/1‑148 (MQ=255) tgGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCt < 2:243550/150‑1 (MQ=255) cagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGc < 2:229716/109‑1 (MQ=255) cagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGc > 1:229716/1‑109 (MQ=255) cagccaCCGTTGCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGTTTGCATAGCCAGAACAGCTACCACGGGCCGCGCCTCCACACGTTCTACCt < 2:142918/150‑1 (MQ=255) gccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtgt < 1:1003055/150‑1 (MQ=255) gccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtgt < 2:482484/150‑1 (MQ=255) ccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTggg > 2:114665/1‑97 (MQ=255) ccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTggg < 1:114665/97‑1 (MQ=255) caCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATGGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTgtgt < 1:1201918/150‑1 (MQ=255) cGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATc < 1:1193406/150‑1 (MQ=255) tttCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCcg > 1:995720/1‑150 (MQ=255) gACAGCGCCCAGGCGCTGACTGAGCACCGCCTGtt < 2:1031161/35‑1 (MQ=255) gACAGCGCCCAGGCGCTGACTGAGCACCGCCTGtt > 1:1031161/1‑35 (MQ=255) tcAGCGCCTGGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCAGGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAAGAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCgg > 1:683595/2‑150 (MQ=255) aCAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtgt < 2:57114/138‑1 (MQ=255) aCAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtgt > 1:57114/1‑138 (MQ=255) ccAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCAtctc < 1:1150769/150‑1 (MQ=255) | CATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCG‑GTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTC > NC_002947/4642507‑4642804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |