| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,079,174 | T→A | 8.2% | intergenic (‑371/+26) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,079,174 | 0 | T | A | 8.2% | 216.1 / 7.9 | 71 | intergenic (‑371/+26) | mgtE/PP_t56 | magnesium transporter/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base T (32/33); new base A (4/2); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCAGGTTACCACTGGCTTACTGAAA > NC_002947/5079028‑5079318 | cTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTAtt > 2:683500/1‑150 (MQ=255) tCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGTACAAACAAAAAGCCCGCTCTATTGAg < 1:490123/150‑1 (MQ=255) tGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGCCGCGCCGTAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCggg < 1:874132/150‑1 (MQ=255) tGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTCTTGAGCggg < 2:825375/150‑1 (MQ=255) acgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCttt < 2:634854/150‑1 (MQ=255) acgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCttt < 2:314622/150‑1 (MQ=255) acgaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCttt > 1:6139/1‑150 (MQ=255) gaTTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCttttt < 1:1093716/150‑1 (MQ=255) tgttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑At < 2:629529/150‑1 (MQ=255) tgttgtGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑At < 2:1284314/150‑1 (MQ=255) tgtgGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATggg < 1:769612/150‑1 (MQ=255) aTGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATg < 2:620374/150‑1 (MQ=255) tttGATTTTTGAGGCCGCTCAGCGGCTCGACACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTcagcag > 1:997755/1‑150 (MQ=255) ttGATTTTTGAGGCCGCTCAGCTGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑CTGAGGTATGGCGGACTCAGCAgg > 2:63892/1‑150 (MQ=255) tGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCACTCAATGAGGGTGAGCGTATATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGa < 2:997755/150‑1 (MQ=255) tttttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGc > 2:279663/1‑112 (MQ=255) tttttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGc < 1:279663/112‑1 (MQ=255) tttttGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTc > 2:512492/1‑150 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGc > 2:500009/1‑150 (MQ=255) cGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGa < 2:170783/150‑1 (MQ=255) cTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCCACATTAAAAAGCCCGCTCAATTGAAC‑GACTGTCGGTAGCGTGTAGGGCGGACTCAGCAGGATTCGAA‑CCTGCGAcc < 1:348700/150‑1 (MQ=255) tCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGG‑TTCGAATCCTGctgagt < 2:1182136/150‑6 (MQ=255) aGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCt > 2:254209/1‑150 (MQ=255) tCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATggg < 1:42207/106‑1 (MQ=255) tCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATggg > 2:42207/1‑106 (MQ=255) cAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGt > 2:223846/1‑150 (MQ=255) cAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGt < 2:6139/150‑1 (MQ=255) aaaCTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTa < 1:500009/150‑1 (MQ=255) cacCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTc < 1:1195943/141‑1 (MQ=255) cacCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTc > 2:1195943/1‑141 (MQ=255) acCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGt > 1:580780/1‑150 (MQ=255) acCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGt > 1:318529/1‑150 (MQ=255) acCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGt > 2:347730/1‑150 (MQ=255) cGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTca > 2:285152/1‑108 (MQ=255) cGCAATCATTACAGAAGAGCGTAGATCAACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTca < 1:285152/108‑1 (MQ=255) aaTCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGcc > 1:1122430/1‑141 (MQ=255) aaTCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGcc < 2:1122430/141‑1 (MQ=255) aTTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATggg > 1:565482/1‑87 (MQ=255) aTTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATggg < 2:565482/87‑1 (MQ=255) aTTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATcc > 2:37934/1‑150 (MQ=255) agaagaGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGACGGATATATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCTAGTACTCTATCCAGCTg > 2:414596/1‑150 (MQ=37) gaagaGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGa < 1:254209/150‑1 (MQ=255) gCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTc > 2:524678/1‑99 (MQ=255) gCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTc < 1:524678/99‑1 (MQ=255) gACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTg > 2:1120598/1‑150 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTAt < 2:771901/70‑1 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTAt > 1:771901/1‑70 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGt < 2:208989/120‑1 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGt > 1:208989/1‑120 (MQ=255) gCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGa > 1:745973/1‑138 (MQ=255) gCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGa < 2:745973/138‑1 (MQ=255) cTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑a < 1:683500/150‑1 (MQ=255) cAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGTTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGt < 1:512492/150‑1 (MQ=255) aaGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGtt > 1:25552/1‑150 (MQ=255) aaGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATGGT‑AGtt > 2:725792/1‑150 (MQ=255) aaGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGCAAAACGCAGACTTTTAA‑CCTCCGTCTTCCCGGGTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGtt < 1:1120598/150‑1 (MQ=25) aGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGttt < 2:580780/150‑1 (MQ=255) aaacaaaAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTAct < 2:984704/97‑1 (MQ=255) aaacaaaAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTAct > 1:984704/1‑97 (MQ=255) aaacaaaAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGTGCTGTGAGTCCGTGATGGT‑AGTTTTAGACCAGGTTACCACt > 1:852189/1‑150 (MQ=255) tcaaaAAGCCCTCTCAATAGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCAGGTTACCACTgg > 2:1135989/2‑150 (MQ=255) aaaaGCCCGCTCAATAGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGTAAGTTTTA‑ACCAAGTTTCCCCTGGCtt > 2:737911/1‑150 (MQ=17) aaaGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCAGGTTACCACTGGCTTa < 2:25552/150‑1 (MQ=255) aaGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGG‑AGGTTTAAAACAGGTTACCGCTGGCTTat > 1:1214221/1‑149 (MQ=18) gCCCGCTCAATAGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt < 1:1239163/98‑1 (MQ=255) gCCCGCTCAATAGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt > 2:1239163/1‑98 (MQ=255) gCCCGCTCAATAGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCAGGTTACCACTGGCTTACTg > 1:1165259/1‑150 (MQ=255) ccggCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCa > 1:1283488/4‑130 (MQ=255) cccGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTCGCCAAGGTTACCCCTGTCCTAccgt > 1:104067/1‑147 (MQ=21) cccGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCa < 2:1283488/130‑1 (MQ=255) cGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCAGGTTACCACTGGCTTACTGaaa > 1:160378/1‑150 (MQ=255) ctctATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTa > 1:789969/1‑121 (MQ=255) ctctATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTa < 2:789969/121‑1 (MQ=255) | CTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTTGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTG‑ATGGGGTATGGCGGACTCAGCAGGATTCGAA‑CCTGCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGT‑AGTTTTAGACCAGGTTACCACTGGCTTACTGAAA > NC_002947/5079028‑5079318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |