Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,846,033 C→T 7.9% intergenic (+49/+42) yfhL → / ← mutM 4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,846,0330CT 7.9% 170.4 / 4.1 63intergenic (+49/+42)yfhL/mutM4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
Reads supporting (aligned to +/- strand):  ref base C (30/28);  new base T (3/2);  total (33/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01

GGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGTA  >  NC_002947/5845888‑5846176
                                                                                                                                                 |                                                                                                                                               
ggTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGCTACCGAAGAACATCTGATGGCCAAGTCTATCTTGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCcaca                                                                                                                                             <  1:926729/150‑1 (MQ=255)
 gTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCcaca                                                                                                                                             <  2:1204928/149‑1 (MQ=255)
 gTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCcaca                                                                                                                                             >  1:1204928/1‑149 (MQ=255)
  tCTGCCGGGTCGACTGCATCCCGCTGGATGAAGAGAATCCAGATTCCGAATAACAGCTGATGGCCAAGTATAGTAATTTTACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGGGAGCAGGCATGCCCGCTCTCACAgg                                                                                                                                           <  1:926445/150‑2 (MQ=255)
     gCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa                                                                                                                                        >  1:109695/1‑150 (MQ=255)
     gCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCAAGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa                                                                                                                                        <  1:1232285/150‑1 (MQ=255)
          gTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGttt                                                                                                                                   <  2:200220/150‑1 (MQ=255)
           tCGACTGCATCCCGCTGGATGAAGCGCATCCGGACACCGAAGAACAGCTGATGGCCAAGTATGGCCGGATGACTGGCAAGGGCTGATCATTGCCCTTCCCTTCCCGGTCCCTGTGAGAGCGGGCCTGCCTGCTCCCAGCGTTTAGATTTc                                                                                                                                  >  2:101148/1‑150 (MQ=255)
              aCTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCt                                                                                                                               >  2:1214770/1‑150 (MQ=255)
                        gCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGtt                                                                                                                     >  1:1128637/1‑150 (MQ=255)
                         cTGGATGAAGCGCATCAGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGtcc                                                                                                                    <  2:566284/150‑3 (MQ=255)
                            gATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCAAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTGCCCTGCACGGTGCCTGTGAGAGCGGGCATGCCGGCTCCGTCAGTTTAGGTTTCGCTTCAACAGGTTCGCa                                                                                                                 <  2:292100/150‑1 (MQ=255)
                                 aGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGaa                                                                                                            <  2:527885/150‑1 (MQ=255)
                                  gcgcATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAAc                                                                                                           >  2:849815/1‑150 (MQ=255)
                                     cATCCCGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGTTCATTGCCCTTCCCTTCACCGTCCCTGTGAGGGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGtt                                                                                                        <  1:101148/150‑1 (MQ=255)
                                      aTCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCa                                                                                                                 >  2:1117740/1‑140 (MQ=255)
                                      aTCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCa                                                                                                                 <  1:1117740/140‑1 (MQ=255)
                                      aTCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGAGGGCGTGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGttt                                                                                                       >  2:676003/1‑150 (MQ=255)
                                          ggAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATc                                                                                                   >  1:1147692/1‑150 (MQ=255)
                                          ggAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTACATCTGATGGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTCCAAACGTTTCGCATTGAACggggcttc                                                                                                   >  1:921680/1‑143 (MQ=255)
                                               ccGAAGAACAGCTGATGGCCAAGTATCGCCGGATCCCTGGCAAGGGCTGATCATTGCCCTTTCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTgg                                                                                              <  1:650996/150‑1 (MQ=255)
                                                       cAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa                                                                                                                                        >  2:801661/1‑100 (MQ=255)
                                                       cAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTa                                                                                                                                        <  1:801661/100‑1 (MQ=255)
                                                        aGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCggg                                                                                     <  2:1147692/150‑1 (MQ=255)
                                                        aGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCggg                                                                                     <  1:835642/150‑1 (MQ=255)
                                                           tGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAAAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAg                                                                                  >  2:32540/1‑150 (MQ=255)
                                                            gATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGt                                                                                 <  2:695836/150‑1 (MQ=255)
                                                              tGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTac                                                                               >  1:155128/1‑150 (MQ=255)
                                                                    aGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTc                                                                         <  2:793068/150‑1 (MQ=255)
                                                                     gTATCGCCTGATCACTCGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAATTTAGGTTTCGCCTCAACAGGTTCGCAGCGAACGTTTCATTGTTACCAGCGCGGGCAGTACAGCCTCg                                                                        >  2:28716/1‑150 (MQ=255)
                                                                        tCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGccc                                                                     >  1:1285714/1‑150 (MQ=255)
                                                                                   cTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCCTCGTTgg                                                                                              >  2:140452/1‑114 (MQ=255)
                                                                                   cTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTgg                                                                                              <  1:140452/114‑1 (MQ=255)
                                                                                    tGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGtt                                                                                                <  1:11131/111‑1 (MQ=255)
                                                                                    tGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGtt                                                                                                >  2:11131/1‑111 (MQ=255)
                                                                                       cAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCa                                                      <  2:1086473/150‑1 (MQ=255)
                                                                                        aaGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGtt                                                                                                >  2:447693/1‑107 (MQ=255)
                                                                                        aaGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGtt                                                                                                <  1:447693/107‑1 (MQ=255)
                                                                                            gCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTcg                                                 >  1:119976/1‑150 (MQ=255)
                                                                                                   aTTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACt                                          >  1:520367/1‑150 (MQ=255)
                                                                                                       cccTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATc                                                                                                   >  1:1225895/1‑89 (MQ=255)
                                                                                                       cccTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATc                                                                                                   <  2:1225895/89‑1 (MQ=255)
                                                                                                            cccTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGc                                 >  1:941924/1‑150 (MQ=255)
                                                                                                                    ctaaacTGTGGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATAc                             >  2:1045890/6‑146 (MQ=39)
                                                                                                                    ctaaacTGTGGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATAc                             <  1:1045890/141‑1 (MQ=39)
                                                                                                                        ccTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACg                     >  2:1012133/1‑150 (MQ=255)
                                                                                                                        acTGTGGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACg                     >  2:906267/2‑150 (MQ=255)
                                                                                                                         cTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACgg                    <  1:1214770/150‑1 (MQ=255)
                                                                                                                          tgtgAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGc                                                                >  2:446251/1‑105 (MQ=255)
                                                                                                                          tgtgAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGc                                                                <  1:446251/105‑1 (MQ=255)
                                                                                                                          tgtgAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATCACTTGCACGGc                   >  1:379118/1‑150 (MQ=255)
                                                                                                                           gtgGGAGCAGGCATGCCCGCTCTCACAGTTTAGGTTTCGCTTCAACAGGGTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCt                  >  2:501855/1‑150 (MQ=255)
                                                                                                                             gagaGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGc                >  2:256541/1‑150 (MQ=255)
                                                                                                                             gagaGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGc                <  2:379118/150‑1 (MQ=255)
                                                                                                                                 gCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGc            <  1:256541/150‑1 (MQ=255)
                                                                                                                                       aTGCCCGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGcc      >  1:1220067/1‑150 (MQ=255)
                                                                                                                                        tGCCCGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGccc     <  2:1220067/150‑1 (MQ=255)
                                                                                                                                        ctccTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCCAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGGCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGccc     <  1:1037305/148‑1 (MQ=255)
                                                                                                                                           cTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATCCCTTGCACAGCTGCACGCCGTGccctag  >  2:1037305/1‑147 (MQ=255)
                                                                                                                                           cTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGc            <  2:1048887/140‑1 (MQ=255)
                                                                                                                                           cTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGc            >  1:1048887/1‑140 (MQ=255)
                                                                                                                                              cTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGc                                                          >  2:1105479/1‑91 (MQ=255)
                                                                                                                                              cTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGc                                                          <  1:1105479/91‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
GGTCTGCCCGGTCGACTGCATCCCGCTGGATGAAGCGCATCCGGAAACCGAAGAACAGCTGATGGCCAAGTATCGCCGGATCACTGGCAAGGGCTGATCATTGCCCTTCCCTGCACGGTCCCTGTGAGAGCGGGCATGCCTGCTCCCACAGTTTAGGTTTCGCTTCAACAGGTTCGCAGCGAACGTTTCATCGTTGGCAGCGCGGGCAGTACACGCTCGCCCTCTGCCCCAGCTTCACTTCGCGCAACTCAGTGCCGCATACCTTGCACGGCTGCCCGCCACGCCCGTA  >  NC_002947/5845888‑5846176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: