| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,649 | Δ1 bp | 5.5% | coding (88/522 nt) | hscB → | DnaJ‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,649 | 0 | C | . | 5.5% | 406.1 / 17.7 | 127 | coding (88/522 nt) | hscB | DnaJ‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base C (64/55); new base . (4/3); total (69/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.36e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
AACAACCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCG > NC_002947/980500‑980796 | aacaacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGCTTGACGCTGGCCGGGGGTACTGCAAGTCA‑TTACGCAGTGTTAGACCTCCAGCCAAGCTTGTGTCTGGATCTCGACACCCTAGCCA‑CTAGCTATCGCCAGc > 2:515020/1‑150 (MQ=255) ccccAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCG‑CTCGCGATAGCGAG‑TGGcca < 2:164465/150‑2 (MQ=255) cAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCAGCTCGCGATAGCGAG‑TGGCCagc < 2:940278/150‑1 (MQ=255) aaCGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCcgcg > 1:1561658/1‑150 (MQ=255) tGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGt < 1:662857/150‑1 (MQ=255) gccgtgtgtgtGGCTGCGGCGAACGCTTCAACGTTTGAGGCTGGCTATCGTGACTCCTTGTCA‑TTCCGCATTGTTTGTCCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCa < 1:965974/147‑1 (MQ=255) ggTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATc < 2:2949745/150‑1 (MQ=255) ggTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATc < 1:423324/150‑1 (MQ=255) tGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCt > 1:2913067/1‑150 (MQ=255) ggCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa > 1:1044192/1‑134 (MQ=255) ggCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa < 2:1044192/134‑1 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCTTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt > 2:2598190/1‑150 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 1:2797201/150‑1 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 2:115329/150‑1 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 2:2758896/150‑1 (MQ=255) ggcgAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCg < 1:1763631/150‑1 (MQ=255) gAAAGCTTCAACGTTTGAGGCTGGCTGTGAATACTACTCGTAATTTTCGCAGCG‑ATGACCTCCAGCCAGTGTGCCTTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCTCGAAGGCCATCCTGATCGCTTTGCCGACg > 1:2066184/1‑150 (MQ=255) aaaGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGc > 2:1742900/1‑150 (MQ=255) ttCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCg > 1:574846/1‑150 (MQ=255) ttCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCg > 2:2581759/1‑150 (MQ=255) tCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGa > 2:2713813/1‑150 (MQ=255) tCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TGACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGa > 1:1021239/1‑150 (MQ=255) aaCGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGc < 1:2079654/150‑1 (MQ=255) cGTTTGAGGCTGGCTGTGTGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGt < 2:2066184/150‑1 (MQ=255) tttGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCt < 2:2458551/121‑1 (MQ=255) ttGAGGCTGGCTGTGGGTACTCCTTGTTA‑TTGCGCATTGTGTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCTAGCTGGCCCGCGAAGTCTATCCTTATCGCTTTTCCGTCGCCTCCGAGCGTGag < 2:2930494/150‑1 (MQ=255) tGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACATCCAGCCAAGCTTCCGCCTGGATCTCGACAAGCTGGCCA‑CTCTCAATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGagc > 2:2651318/1‑150 (MQ=255) tggctgTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGt < 1:2222956/106‑1 (MQ=255) tggctgTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGt > 2:2222956/1‑106 (MQ=255) gtgGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa < 2:2801834/99‑1 (MQ=255) gtgGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa > 1:2801834/1‑99 (MQ=255) tgGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTCCCGACGCCTCCGAGCGTGa > 1:1185050/1‑136 (MQ=255) tgGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTCCCGACGCCTCCGAGCGTGa < 2:1185050/136‑1 (MQ=255) gggTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCC‑CTCGCTATCGCGAGCTGCCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt < 2:1668646/150‑1 (MQ=255) gggTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt < 2:1561658/150‑1 (MQ=255) gggTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt < 1:2713813/150‑1 (MQ=255) gggTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt > 2:2726630/1‑150 (MQ=255) ggTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTg > 2:459880/1‑150 (MQ=255) gTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGt < 1:247982/97‑1 (MQ=255) gTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGt > 2:247982/1‑97 (MQ=255) aCTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg > 2:2342815/1‑84 (MQ=255) aCTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg < 1:2342815/84‑1 (MQ=255) tCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaaa > 2:2871865/1‑150 (MQ=255) cTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGc > 2:1435137/1‑109 (MQ=255) cTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGc < 1:1435137/109‑1 (MQ=255) cTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAAt > 1:1048168/1‑150 (MQ=255) gTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCcg > 2:258087/1‑150 (MQ=255) ttACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTGGCCAAGCTGGCCA‑GTCGGTATCGCGAGCTGACCTTCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAACTCCGCGGc > 1:1148318/1‑150 (MQ=255) ttACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGc > 1:340673/1‑150 (MQ=255) aCGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt > 2:304434/1‑98 (MQ=255) aCGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 1:304434/98‑1 (MQ=255) aTTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGt > 1:256492/1‑78 (MQ=255) aTTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt > 1:531280/1‑94 (MQ=255) aTTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 2:531280/94‑1 (MQ=255) ttGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAac < 1:1742900/150‑1 (MQ=255) tGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAacg > 1:739802/1‑150 (MQ=255) gTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAacga > 1:1472213/1‑150 (MQ=255) tttGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAacgac > 2:393541/1‑150 (MQ=255) tttGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAacgac > 1:16079/1‑150 (MQ=255) tGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGc > 1:1996307/1‑150 (MQ=255) tGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGc < 2:1996307/150‑1 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGc < 2:1464466/86‑1 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGc > 1:1464466/1‑86 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc < 1:2871865/150‑1 (MQ=255) ccAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCa < 1:1898412/150‑1 (MQ=255) cAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGc < 2:1283005/143‑1 (MQ=255) cAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGc > 1:1283005/1‑143 (MQ=255) gCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTgc < 2:340673/150‑1 (MQ=255) cTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTa < 2:2935362/101‑1 (MQ=255) ttCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAac > 2:62917/1‑129 (MQ=255) ttCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAac < 1:62917/129‑1 (MQ=255) tCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTCCCAGACGCTGCGCa < 1:1920434/150‑1 (MQ=255) gTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTg > 1:769027/1‑150 (MQ=255) cTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTgcg > 2:788733/1‑150 (MQ=255) tctcGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCcgcg > 2:1419687/1‑150 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTcc < 1:2220177/69‑1 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTcc > 2:2220177/1‑69 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTAtt > 1:2435407/1‑87 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTAtt < 2:2435407/87‑1 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCcg < 1:243035/103‑1 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgc > 2:2284976/1‑150 (MQ=255) aCAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgcg > 1:620025/1‑150 (MQ=255) gccagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgcgc < 1:699041/138‑1 (MQ=255) gccagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgcgc > 2:699041/6‑143 (MQ=255) gccagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTAGCGCGCGCTAc > 2:1638990/6‑150 (MQ=255) gCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc < 2:1105623/150‑1 (MQ=255) cagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACct > 1:1068263/4‑150 (MQ=255) cagcTCGCGATAGCGAG‑TGGCCCGCGAAGTACATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCCGTGCGCCGCGTCGCGCGCGCTACct > 1:600175/4‑150 (MQ=255) a‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctg > 1:591973/1‑150 (MQ=255) cTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCATCAAAACTATGTCAACCAGGCCGAGCGTGAGCAGCAGGTTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGAAGCTGCGCACTGCTCCGCGTCGCGCGCGCTACctgc > 1:1302703/1‑150 (MQ=255) tCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCa < 1:944012/111‑1 (MQ=255) tgCTATCGCGCGCTGGTCCTCGAAATCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctgctg < 2:2859710/149‑1 (MQ=255) cGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctgctg < 1:459880/150‑1 (MQ=255) cTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGAAACCCCCGATCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACCACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTgga > 1:2859710/1‑149 (MQ=255) tATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGt > 1:2787721/1‑57 (MQ=255) tATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGcc > 2:2084714/1‑150 (MQ=255) tCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCAt > 2:2606869/1‑150 (MQ=255) gcgAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCa > 2:427164/1‑150 (MQ=255) aGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCg < 1:2598190/150‑1 (MQ=255) aGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCg < 1:2651318/150‑1 (MQ=255) | AACAACCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCA‑TTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCG > NC_002947/980500‑980796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |