| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,555,432 | Δ1 bp | 6.7% | intergenic (+28/+46) | sbcB → / ← PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,555,432 | 0 | G | . | 6.7% | 317.2 / 18.3 | 104 | intergenic (+28/+46) | sbcB/PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Reads supporting (aligned to +/- strand): ref base G (48/47); new base . (3/4); total (53/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.91e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCACT > NC_002947/1555284‑1555577 | gggCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑Atgt < 1:2642415/150‑1 (MQ=255)gggCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑Atgt < 1:1369835/150‑1 (MQ=255) ggCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑Atgtg > 2:1399908/1‑150 (MQ=255) gCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGc > 1:621760/1‑150 (MQ=255) ccGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGc > 1:2745680/2‑150 (MQ=255) cGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGcc < 1:986139/150‑1 (MQ=255) gACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCg < 2:2582707/150‑1 (MQ=255) ttCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑CATTGCCGGCg > 1:2424231/1‑150 (MQ=255) gAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGttt > 1:1208707/1‑150 (MQ=255) gAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGttt > 2:1824647/1‑150 (MQ=255) cgcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTtgttgt < 2:597192/150‑1 (MQ=255) gcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTtgtg > 2:1101106/1‑150 (MQ=255) cgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACAT‑TGCCGGCGt < 1:1805623/139‑1 (MQ=255) cgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACAT‑TGCCGGCGt > 2:1805623/1‑139 (MQ=255) cgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGc < 1:1101106/150‑1 (MQ=255) cAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACAT‑TGCCGGCGTTTttgtttatctgc < 2:2424231/150‑8 (MQ=38) gCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTTCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCTGGCA‑ATGTGCCGGCGTTTGATGTGTGCGAAGc > 1:633209/1‑150 (MQ=255) gCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGc < 2:689714/150‑1 (MQ=255) gCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAAGCGGCTGATGGCAGATAAACAAAAACGCCGACA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGc < 2:131368/150‑1 (MQ=255) aaGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCaa > 1:551936/1‑150 (MQ=255) aaGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCaa > 2:701263/1‑150 (MQ=255) cTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTTGGCGAAGCAAGAgg < 2:2745680/150‑1 (MQ=255) ggAGGGCGCCGACGAGGCATGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCCCCGCCCTATCTCGTTCTTTAGTCAGTAGGCTGAGGGAAGATAAAAAAATCCGCCGGCA‑ATGTGTCGTCGTTTTTGTTGTGCGAAGCAAGAGGGCg < 1:701263/150‑1 (MQ=255) gggCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTAt < 2:1208707/150‑1 (MQ=255) gcCGACGAGGCAGGCAGGCGCGTGTTGTAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCgg > 1:2388560/1‑150 (MQ=255) gcCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCgg > 2:2209632/1‑150 (MQ=255) ggcaggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAg > 2:143309/1‑150 (MQ=255) caggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTc < 2:1170608/150‑1 (MQ=255) aggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGaa < 2:1330993/121‑1 (MQ=255) ggcaggcGAGTATAAGAGACCTTTCAACTGTATGTTCGACAATTGCAGGAACGCTATTCAATCGGCTCGTGGTAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAATAGGGCGTATGCGGATAATCAGTCca < 1:2972451/150‑1 (MQ=255) gcgTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑Atgt > 2:3004308/1‑91 (MQ=255) gcgTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑Atgt < 1:3004308/91‑1 (MQ=255) gcgTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGt < 1:1277260/150‑1 (MQ=255) gtgtTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTg > 2:1478598/1‑150 (MQ=255) aGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCt < 1:2209632/150‑1 (MQ=255) ccTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTc < 1:1824647/150‑1 (MQ=255) tGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGc > 2:2097579/1‑96 (MQ=255) tGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGc < 1:2097579/96‑1 (MQ=255) tGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGTGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCaa > 2:1772180/1‑150 (MQ=255) aaCTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTAt < 2:1033221/109‑1 (MQ=255) aaCTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTAt > 1:1033221/1‑109 (MQ=255) aaCTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt < 1:1103812/118‑1 (MQ=255) aaCTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt > 2:1103812/1‑118 (MQ=255) cTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGc > 2:3029337/1‑109 (MQ=255) cTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGc < 1:3029337/109‑1 (MQ=255) cTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGt > 1:1030680/1‑150 (MQ=255) cATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTc > 1:1120693/1‑139 (MQ=255) aTGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTcgcc > 1:1803848/1‑150 (MQ=255) tGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCTTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCcagca < 2:2731931/121‑1 (MQ=255) tGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCcagca > 1:2731931/1‑121 (MQ=255) gCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGTGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTcgccgc < 1:1772180/150‑1 (MQ=255) gCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGATTGCCCAGCTTTCAACCACGTcgccgc > 1:1411464/1‑150 (MQ=255) cTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCgccgcc < 1:143309/150‑1 (MQ=255) gACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGAATGGTGAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCa > 1:2636085/1‑150 (MQ=255) aCAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCaa > 2:299132/1‑150 (MQ=255) gCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCt > 2:2101153/1‑150 (MQ=255) gAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCaa > 1:1152160/1‑123 (MQ=255) gAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCaa < 2:1152160/123‑1 (MQ=255) gAACGCTATTAAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTcc < 1:1399908/150‑1 (MQ=255) aaCGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCa > 1:1325358/1‑150 (MQ=255) tATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCaa < 1:2822370/134‑1 (MQ=255) tATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCaa > 2:2822370/1‑134 (MQ=255) tATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCtt > 2:1638739/1‑150 (MQ=255) tCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCa < 2:15585/150‑1 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg > 1:2477461/1‑150 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg > 2:23673/1‑150 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg > 2:2115860/1‑150 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAg > 2:216865/1‑149 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAg < 1:216865/149‑1 (MQ=255) tCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg > 2:2486748/1‑148 (MQ=255) tCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg < 1:2486748/148‑1 (MQ=255) cTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtg < 2:2388560/150‑1 (MQ=255) tGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgt < 2:1325358/150‑1 (MQ=255) gCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAgg > 2:3026162/1‑84 (MQ=255) gCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAgg < 1:3026162/84‑1 (MQ=255) cAGATAAACAAAAACGCCGGCA‑ATGTGCCGTCGTTTTTGTTGTGCGAATCAAGAGGGCGTATGCGGATAATTAGTCCAGCAGGGTTGACTAGTTTTCCACCACGTGGGATCCACAAGTGCCTTTCCACTCTTTCAGGGTCTTGTGGTTgc < 2:633209/150‑1 (MQ=255) gATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTgccg > 1:1760599/1‑150 (MQ=255) cAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGcc < 1:1042557/81‑1 (MQ=255) cAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGcc > 2:1042557/1‑81 (MQ=255) aaaaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTgg > 2:36692/1‑150 (MQ=255) aaaaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTACAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTgg > 2:2924749/1‑150 (MQ=255) aaaCGCCGGCACAT‑TGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgtg < 2:2348494/134‑1 (MQ=255) aaaCGCCGGCACAT‑TGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgtg > 1:2348494/1‑134 (MQ=255) aaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg < 1:1095503/126‑1 (MQ=255) aaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg > 2:1095503/1‑126 (MQ=255) aaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGtt < 1:1478598/150‑1 (MQ=255) aaCGCCGGCACAT‑TGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTc < 1:2431744/128‑1 (MQ=255) aaCGCCGGCA‑CATTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTc > 2:2431744/1‑128 (MQ=255) aCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAGGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGACGCGTTTGGTTTc < 2:1411464/150‑1 (MQ=255) aCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgt > 2:1908742/1‑131 (MQ=255) aCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgt < 1:1908742/131‑1 (MQ=255) aCGCAGGCA‑ATGTGTCGGCGTTTTTGTTGTGAGAAGCAAGAGGGCGTACGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTc < 2:551936/150‑1 (MQ=255) gCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGa > 1:1201128/1‑150 (MQ=255) gCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGa < 1:2115860/150‑1 (MQ=255) ccGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGAt < 2:2077379/150‑1 (MQ=255) ccGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCGTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGAt < 2:1030680/150‑1 (MQ=255) cGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGGGTATGCGGATAATCAGTCCAGCAGGGTTGCCCGGCTTTCAACCACGTCGCCGCCCAAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATc > 1:2926810/1‑150 (MQ=255) cGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATc > 2:2620655/1‑150 (MQ=255) ggCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGtt > 1:2346171/1‑130 (MQ=255) cA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCACt < 1:299132/150‑1 (MQ=255) | GGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCACT > NC_002947/1555284‑1555577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |