| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,915,640:1 | +A | 9.1% | intergenic (+26/‑263) | fklB‑II → / → PP_1715 | FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,915,640 | 1 | . | A | 9.1% | 364.9 / 33.5 | 99 | intergenic (+26/‑263) | fklB‑II/PP_1715 | FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (42/48); new base A (5/4); total (47/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
CCCGCTGATCCCGGCCAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGACTGTGTAAAAA > NC_002947/1915491‑1915789 | cccGCTGATCCCGGCCAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGcccc > 1:2249629/1‑150 (MQ=255) gCTGATCCCGGCCAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCc‑aca > 1:1048767/1‑150 (MQ=255) tCCCGGCCAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCACGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGTATCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑CCAttgtt < 1:1329379/150‑1 (MQ=255) cGGCCAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTggg < 1:952040/150‑1 (MQ=255) cAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGt > 2:586322/1‑150 (MQ=255) cAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGt < 2:2707178/150‑1 (MQ=255) aaCTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCCCACCCAATTGACAAAAGAAGCACCTGCCAAGTAACATTGGACGGTTGTCCGAAACTCCCC‑ACATTGTTGGGGCGtt > 1:1301662/1‑150 (MQ=255) tCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTc > 2:1160603/1‑150 (MQ=255) tCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTc > 1:1772591/1‑150 (MQ=255) tCGGGACTGGTGTTCGAGCTGGAACTGAGGGCCATCAAGGACCCGGCCCAGTTGCAAGGTGGCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTc < 2:650185/150‑1 (MQ=255) gTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGATGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGtt < 1:2480612/150‑1 (MQ=255) gTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGATGGTTGTCGGAAACGACCC‑ACATTGTTGGGGCGTTTTCGtt > 1:2627084/1‑150 (MQ=255) tACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGCTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGttt < 2:1772591/150‑1 (MQ=255) cTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGTCCCTGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTtgt < 1:1570448/150‑1 (MQ=255) ggTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGc < 2:1048767/150‑1 (MQ=255) ggTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGc < 2:1794324/150‑1 (MQ=255) gtgtTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGcc < 2:1107136/150‑1 (MQ=255) gtgtTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGGTTTCGTTTGTGcc > 1:1107136/1‑150 (MQ=255) ttCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGAt < 1:2722207/150‑1 (MQ=255) ttCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGAt > 1:1081263/1‑150 (MQ=255) aTCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGa < 2:1081263/150‑1 (MQ=255) aTCTGGAACTGATCGCCATCAAGGACCCCGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCGAGTAACATTGGCTGGTTGTCGGAAACGCGCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGa < 1:1238520/150‑1 (MQ=255) gAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAAc < 2:523713/150‑1 (MQ=255) aCTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCCAACAATG‑TGGGGCGttt > 2:68492/1‑125 (MQ=255) aCTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCCAACAATG‑TGGGGCGttt < 1:68492/125‑1 (MQ=255) ggATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCAAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGc < 2:2015322/149‑1 (MQ=255) aTCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCaa < 1:2394230/150‑1 (MQ=255) tCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCCAACAATG‑TGGGGCGttt > 2:616454/1‑120 (MQ=255) tCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCCAACAATG‑TGGGGCGttt < 1:616454/120‑1 (MQ=255) tCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTgg > 2:290961/1‑137 (MQ=255) tCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTgg < 1:290961/137‑1 (MQ=255) gCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGAtt < 1:2286787/133‑1 (MQ=255) gCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGAtt > 2:2286787/1‑133 (MQ=255) cATCAAGGAGCCGGGCCAGATGCAAGGTGCCGAGCCGCAGGCCGAAGCGCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCt > 2:188396/1‑150 (MQ=255) cATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTTCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGc < 1:1464018/143‑1 (MQ=255) cATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGc > 2:1464018/1‑143 (MQ=255) aaGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCTTTTGTGCCGATTGGACGAACCTGCAACAGCTGATa < 2:2411917/150‑1 (MQ=255) aaGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATa < 1:1160603/150‑1 (MQ=255) ggACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACt < 2:1301662/150‑1 (MQ=255) ccGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGa > 2:353057/1‑124 (MQ=255) ccGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGa < 1:353057/124‑1 (MQ=255) ccGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTg < 1:2722008/141‑1 (MQ=255) cGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCg > 2:2011937/1‑150 (MQ=255) ggCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGGCAAACCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCGGATTGGACGAACCTTCAACAGCTTATACTTTCCGa > 1:1300781/1‑150 (MQ=255) ccAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCCAACAATG‑TGGGGCGtt < 1:959520/100‑1 (MQ=255) ccAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGa > 1:3070854/1‑150 (MQ=255) tGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGc < 1:1246836/150‑1 (MQ=255) aaGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGc > 2:476015/1‑150 (MQ=255) ccGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTgaag < 2:3070854/150‑1 (MQ=255) gCAGGCCGAGGCCCTTGAAG‑AGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGa < 2:1792626/150‑1 (MQ=255) gCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAAc > 1:170582/1‑103 (MQ=255) gCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAAc < 2:170582/103‑1 (MQ=255) gCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAgg > 2:2562185/1‑150 (MQ=255) gCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGCGGAAATGCAGCGTGAAGAAGTAGGATGt < 2:155607/150‑1 (MQ=255) gCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGAAAACGCCCCAACAATG‑TGGGGCGtttccg > 2:1321886/1‑76 (MQ=21) gAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTc < 1:1463053/150‑1 (MQ=255) gCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGa < 2:1300781/150‑1 (MQ=255) ccccTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGAc > 2:58712/1‑150 (MQ=255) cccTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGCGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGa < 1:1125544/114‑1 (MQ=255) cccTGAAGAAGCACCTGCCAAGTAACATTGGCAGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGa > 2:1125544/1‑114 (MQ=255) ccTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCt < 1:288816/92‑1 (MQ=255) ccTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCt > 2:288816/1‑92 (MQ=255) ccTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGACGTTTTCGTTTGTGCCGATTGGACGAAc < 1:1845197/90‑1 (MQ=255) tGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTc < 2:1841187/108‑1 (MQ=255) tGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTc > 1:1841187/1‑108 (MQ=255) gaagaaGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCaaa > 1:2273379/1‑150 (MQ=255) gaagaaGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGCAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCaaa > 1:1568786/1‑150 (MQ=255) aagCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCaa > 1:1016739/1‑89 (MQ=255) gCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGttt > 2:1788262/1‑150 (MQ=255) ccTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTgcg > 2:1999556/1‑150 (MQ=255) tGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGc < 2:624899/86‑1 (MQ=255) tGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGc > 1:624899/1‑86 (MQ=255) tGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGcgcc > 1:2514478/1‑150 (MQ=255) ccAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGcgccgc > 1:441153/1‑150 (MQ=255) tAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTa < 2:2249629/150‑1 (MQ=255) cATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTc > 2:449128/1‑150 (MQ=255) aTTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGTCGCAAATCGTTTGCGCCGCAGGTAGTCa < 2:1594739/150‑1 (MQ=255) gCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAg > 2:803155/1‑139 (MQ=255) gCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAg < 1:803155/139‑1 (MQ=255) gCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTCTTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGc < 1:2956946/150‑1 (MQ=255) tGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGt < 1:2562185/150‑1 (MQ=255) ttGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGaa > 2:655205/1‑150 (MQ=255) ttGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGaa > 2:654975/1‑150 (MQ=255) tCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGaaa > 2:2184223/1‑81 (MQ=255) tCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGaaa < 1:2184223/81‑1 (MQ=255) acgaaaaCGCCCCAACAATG‑TGGGGCGTATTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACg > 2:1629300/5‑150 (MQ=255) ggAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGAc < 1:476015/150‑1 (MQ=255) ggAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGAc > 2:179263/1‑150 (MQ=255) gAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGACt < 1:449128/150‑1 (MQ=255) aaCGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGACtgt > 2:2895428/1‑150 (MQ=255) gCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCaaa < 1:1471441/108‑1 (MQ=255) cccc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGt > 1:712038/1‑63 (MQ=255) cccc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGt < 2:712038/63‑1 (MQ=255) cccc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTgc < 1:847149/115‑1 (MQ=255) cccc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTgc > 2:847149/1‑115 (MQ=255) cccc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGACTGTGTaa > 2:1310142/1‑150 (MQ=255) ccc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGAc > 1:761294/1‑101 (MQ=255) ccc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGAc < 2:761294/101‑1 (MQ=255) cc‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGACTGCGTaaaa > 1:2453994/1‑150 (MQ=255) c‑acaTTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGACTGTGTaaaaa > 1:2376643/1‑150 (MQ=255) | CCCGCTGATCCCGGCCAACTCGGTACTGGTGTTCGATCTGGAACTGATCGCCATCAAGGACCCGGCCCAGTTGCAAGGTGCCGAGCCGCAGGCCGAAGCCCCTGAAGAAGCACCTGCCAAGTAACATTGGCTGGTTGTCGGAAACGCCCC‑ACATTGTTGGGGCGTTTTCGTTTGTGCCGATTGGACGAACCTGCAACAGCTGATACTGTCCGAGGAAATGCAGCGTGAAGAAGTAGGATGTTTCTGACGCAAATCGTTTGCGCCGCAGGTAGTCATGGCGTGAAACGACTGTGTAAAAA > NC_002947/1915491‑1915789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |