| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,340,622:1 | +A | 5.9% | coding (249/1587 nt) | ybiT ← | ABC‑F family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,340,622 | 1 | . | A | 5.9% | 476.8 / 22.7 | 118 | coding (249/1587 nt) | ybiT | ABC‑F family ATPase |
| Reads supporting (aligned to +/- strand): ref base . (48/63); new base A (2/5); total (50/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
CTCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTG > NC_002947/3340475‑3340766 | cTCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑Tc < 1:2136855/150‑1 (MQ=255) gtgtAGCCGCCCATTTCGGCTAATTCGGTTTCCAGCTCGGCGACGGCCATGAAATACTCATTAAACCTCCCCTTCGACAACTAGATACGCTCACCCTAGGATTTGAATTACCCTAGTGTGCCGGGTCCCATGATCACCGTG‑TCGATCACg < 1:2995654/150‑1 (MQ=255) atgtAGCCGTCCATTTCGACATATACGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTTGGTCATTTTCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCTACCGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACg < 2:218456/149‑1 (MQ=255) tAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTg < 1:2945100/150‑1 (MQ=255) gCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGaa < 2:174129/150‑1 (MQ=255) gCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTAGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGaa < 1:1574356/150‑1 (MQ=255) cGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAAtt < 2:472154/150‑1 (MQ=255) gTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTc < 2:1803917/150‑1 (MQ=255) tCCATTTCGGCGAATTCGGTTTAAAGCGCCCTGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTcc < 1:422/150‑1 (MQ=255) ccATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGatcatgg < 2:845463/150‑7 (MQ=255) ccATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGatcatgg < 1:2991281/150‑7 (MQ=255) cacttCGGGGAATTCGGTTTCCAGCGCGGCGACGGCCATGCCGTCTTCTTGGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTc < 2:495354/147‑1 (MQ=255) tCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAg < 2:2065226/150‑1 (MQ=255) aaTTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAAc < 2:1358614/150‑1 (MQ=255) aaTTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAAc > 1:1351714/1‑150 (MQ=255) ttCGGTTTCCAGCTCGGCGACGTCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTg < 1:937703/150‑1 (MQ=255) cGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGt < 1:101806/150‑1 (MQ=255) gTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTCGGCGAACTGGTcc < 2:1443369/150‑1 (MQ=255) gTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTcc < 1:200045/150‑1 (MQ=255) aGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAgg > 1:693992/1‑133 (MQ=255) aGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAgg < 2:693992/133‑1 (MQ=255) aGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGgcgc > 1:2753320/1‑150 (MQ=255) gCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCa > 1:1958216/1‑150 (MQ=255) cTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAg < 1:1099079/150‑1 (MQ=255) aCGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGccc < 2:1144735/150‑1 (MQ=255) ggCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAg > 2:1011829/1‑150 (MQ=255) ggCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAg < 2:1596563/150‑1 (MQ=255) ccATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGc < 1:1044696/150‑1 (MQ=255) ccATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGACTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAg < 1:1804760/119‑1 (MQ=255) cATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCA‑GGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg < 1:1198361/150‑1 (MQ=255) aTGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg < 1:20668/150‑1 (MQ=255) aTGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg < 1:1438589/150‑1 (MQ=255) tGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCggg > 1:838866/1‑150 (MQ=255) cGTCTTCTTCGGTCATTTCCGGCCGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTAt > 1:416199/1‑150 (MQ=255) cttcGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCt < 2:1042924/150‑1 (MQ=255) cttcGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCt < 2:568608/150‑1 (MQ=255) cGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTc < 1:1635285/148‑1 (MQ=255) cGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTc > 2:1635285/1‑148 (MQ=255) cGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGa < 1:1011829/150‑1 (MQ=255) ggTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAg > 1:2701379/1‑150 (MQ=255) ggTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGAAAACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTACTAGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAg > 1:13168/1‑150 (MQ=255) aTTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGatca < 1:2676252/91‑4 (MQ=38) aTTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGatca > 2:2676252/1‑88 (MQ=38) ttCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGAc < 1:2570306/150‑1 (MQ=255) ttCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGAc < 2:1958216/150‑1 (MQ=255) gCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGc < 1:1921200/150‑1 (MQ=255) gTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTa > 2:1722926/1‑84 (MQ=255) gTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGa < 2:416199/150‑1 (MQ=255) tAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGAc < 2:2753320/150‑1 (MQ=255) gATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACgg > 2:2833545/1‑150 (MQ=255) aTACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGAc > 1:961966/1‑147 (MQ=255) aCGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTc > 1:668262/1‑150 (MQ=255) ggTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGAGCTGGCCTGCGGACGGCTCCa > 1:584482/1‑150 (MQ=255) gTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACgg < 1:1390414/144‑1 (MQ=255) tCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAgg > 1:1409427/1‑150 (MQ=255) cACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTgg < 1:439665/89‑1 (MQ=255) cACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTgg > 2:439665/1‑89 (MQ=255) gCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCAc < 1:3043250/150‑1 (MQ=255) gCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCAc < 2:717119/150‑1 (MQ=255) gCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCAc > 1:2786775/1‑150 (MQ=255) cGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCAccgc < 1:672734/150‑1 (MQ=255) tttGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAg > 2:2294455/1‑150 (MQ=255) tttGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAg < 2:821045/150‑1 (MQ=255) tttGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAg < 2:330347/150‑1 (MQ=255) tttGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAg < 2:919782/150‑1 (MQ=255) gACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGATCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGAt < 1:2883635/150‑1 (MQ=255) gACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAggct > 2:777867/1‑148 (MQ=255) gACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCAAGGTCACCGCCGAGGAt > 2:1636995/1‑150 (MQ=255) aCTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGAtt < 2:838866/150‑1 (MQ=255) tttCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGAtttt > 1:813266/1‑150 (MQ=255) tCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGa < 2:611799/102‑1 (MQ=255) tCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGa < 2:611827/102‑1 (MQ=255) tCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGa > 1:611799/1‑102 (MQ=255) tCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGa > 1:611827/1‑102 (MQ=255) ccACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTc < 2:2981646/94‑1 (MQ=255) ccACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTCGTCCAGGCGGGTAtta > 1:2981646/1‑93 (MQ=255) cacaGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGaa > 2:262339/1‑59 (MQ=255) cacaGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATg > 2:2993849/1‑150 (MQ=255) acaGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg < 1:1547437/86‑1 (MQ=255) acaGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg > 2:1547437/1‑86 (MQ=255) acaGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACCGTGAACTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCGCGAGCATCACCTGGCCTGCGGACGTCTCCAGGTCACCGCCGAGGATTTTCacac > 2:939290/1‑147 (MQ=255) ggCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCGTCATAGACCAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCCAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCTTGAAGGTCg > 2:1643686/1‑150 (MQ=255) gCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGa < 2:1351714/150‑1 (MQ=255) cccATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAg < 2:2477535/86‑1 (MQ=255) cccATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAg > 1:2477535/1‑86 (MQ=255) ccATGATCACCGTG‑TCGATCACGGTGACTTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGc > 1:83466/1‑150 (MQ=255) ccATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGATGATTTTCATGAAGGTCGACTTGCCGc > 2:2123002/1‑150 (MQ=255) ccATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGc > 1:1177940/1‑150 (MQ=255) cATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGAc < 2:1750322/90‑1 (MQ=255) cATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGAc > 1:1750322/1‑90 (MQ=255) cATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAg < 1:1340545/111‑1 (MQ=255) cATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAg > 2:1340545/1‑111 (MQ=255) gATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGcc < 1:227764/93‑1 (MQ=255) gATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGcc > 2:227764/1‑93 (MQ=255) attCACCGTGATCGA‑CACGGTGATTTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGt > 1:2341408/3‑110 (MQ=255) attCACCGTGATCGA‑CACGGTGATTTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGt < 2:2341408/108‑1 (MQ=255) tCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGa < 2:2931044/84‑1 (MQ=255) tCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGa > 1:782930/1‑84 (MQ=255) aCCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATg < 2:1551211/81‑1 (MQ=255) aCCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATg > 1:1551211/1‑81 (MQ=255) | CTCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTG > NC_002947/3340475‑3340766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |