| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,090,930:1 | +G | 5.0% | coding (55/1020 nt) | astA‑II ← | arginine N‑succinyltransferase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,090,930 | 1 | . | G | 5.0% | 498.8 / 18.2 | 119 | coding (55/1020 nt) | astA‑II | arginine N‑succinyltransferase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base . (61/52); new base G (3/3); total (64/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
TTCACTGTCTTCGAGCACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGA > NC_002947/5090784‑5091074 | ttCACTGTCTTCGAGCACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CAt < 1:2741691/150‑1 (MQ=255) ttCGAGCACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CAt < 2:491118/141‑1 (MQ=255) ttCGAGCACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCAAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCAc < 1:2202814/150‑1 (MQ=255) ttCGAGCACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGACGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCAc > 2:12749/1‑150 (MQ=255) gAGCACGAAAAAGTAACTCTCTTCAACGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCAcgtc < 1:2776338/150‑1 (MQ=255) cACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCCCGTCGtt > 2:748084/1‑150 (MQ=255) cACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGtt < 1:1324248/150‑1 (MQ=255) gAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCTCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAg > 2:2166821/1‑150 (MQ=255) gAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAg < 1:2272008/150‑1 (MQ=255) gAAAAAGTAACTCTCTCCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGtt < 2:73851/147‑1 (MQ=255) gAAAAAGTAACTCTCTCCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGtt > 1:73851/1‑147 (MQ=255) aaaaGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGAt < 2:2157571/150‑1 (MQ=255) aaGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCa < 1:1320559/150‑1 (MQ=255) gTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCTCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGc < 1:2166821/150‑1 (MQ=255) tAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGcc < 2:2504544/150‑1 (MQ=255) ttCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTgcgc > 2:2558232/1‑150 (MQ=255) ttCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTgcgc > 1:1479937/1‑150 (MQ=255) tCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGcgcg < 1:1944242/150‑1 (MQ=255) cACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTCCAGC‑CATGCGCTGCAGGTCGTTCAGATCAGCCATTTGCGCgg > 1:814709/1‑150 (MQ=255) cGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGgc > 1:875589/1‑150 (MQ=255) aGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCa > 1:2433205/1‑150 (MQ=255) gCTGACCTCTGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCAc < 1:2652441/150‑1 (MQ=255) cTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCAcc < 2:735661/150‑1 (MQ=255) gACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAg > 1:1244752/1‑150 (MQ=255) ccTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCa > 2:820086/1‑150 (MQ=255) cTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCAt > 1:1880482/1‑150 (MQ=255) cggcggCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCatgctgg < 1:2558232/150‑7 (MQ=255) gcggcgAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGgtg < 1:1103041/150‑1 (MQ=255) gAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATTCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACt > 1:935585/1‑150 (MQ=255) gAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACt > 1:850244/1‑150 (MQ=255) gATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGAGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATAACCAGCATGGTGTCACTCCtt > 1:527967/1‑150 (MQ=255) aTGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCttt < 2:862430/150‑1 (MQ=255) aTGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCttt < 2:140187/150‑1 (MQ=255) tgcctcAGAGGCGGCAATCTTGTCGCCCAGACGGGCAGTGGCGGCCGGGAGCGAGGGGACACCAATGGGGCTGGCTGCAGC‑CATGCGCTGCACGTTGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTg < 2:814709/147‑1 (MQ=255) tGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTg < 2:167557/150‑1 (MQ=255) tGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTg < 2:1244752/150‑1 (MQ=255) gTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTgg > 2:752002/1‑150 (MQ=255) tctcAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCttt < 1:1543897/147‑1 (MQ=255) agagGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGAt < 1:1387673/98‑1 (MQ=255) agagGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGAt > 2:1387673/1‑98 (MQ=255) gagGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACg < 2:1479937/150‑1 (MQ=255) agGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACgg < 1:1167002/150‑1 (MQ=255) gcggcAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGc < 1:820086/150‑1 (MQ=255) aaTCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGGCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCtt > 1:371928/1‑133 (MQ=255) tCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCACTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCAc > 2:430212/1‑150 (MQ=255) ttGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATgcg > 1:1156168/1‑68 (MQ=255) ttGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATgcg < 2:1156168/68‑1 (MQ=255) tGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTc < 2:850244/150‑1 (MQ=255) ccAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACg > 1:383810/1‑150 (MQ=255) ccAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACg > 2:1793146/1‑150 (MQ=255) gAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGgtg < 2:185922/107‑1 (MQ=255) gAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGaaaaa > 1:18340/1‑150 (MQ=255) gCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACggg > 1:778968/1‑125 (MQ=255) cAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGcgcg > 2:763840/1‑83 (MQ=255) cAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGcgcg < 1:763840/83‑1 (MQ=255) cAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAAc > 2:2312675/1‑148 (MQ=255) cAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAAc < 1:2312675/148‑1 (MQ=255) aGTGTCGTTCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGgt > 2:2045008/1‑102 (MQ=255) aGTGTCGTTCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGgt < 1:2045008/102‑1 (MQ=255) tgtCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCg > 1:4401/1‑133 (MQ=255) tgtCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCg < 2:4401/133‑1 (MQ=255) gtcCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTc > 1:2780358/1‑103 (MQ=255) gtcCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTc < 2:2780358/103‑1 (MQ=255) tcCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGGGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGcaggcacc > 1:2359717/1‑150 (MQ=255) cGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGcaggcacccc > 2:2996168/1‑149 (MQ=255) cGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGcaggcaccca > 2:2570682/1‑150 (MQ=255) cGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGcaggcaccca < 1:752002/150‑1 (MQ=255) ggCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGgtg > 1:2016433/1‑93 (MQ=255) gCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGcaggcacccagg > 2:538174/1‑150 (MQ=255) aGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGcaggcacccaggca > 2:1084236/1‑150 (MQ=255) gCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGcaggcacccaggcac < 2:2433205/150‑1 (MQ=255) aGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTg < 1:1294821/150‑1 (MQ=255) ggTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTga > 1:777525/1‑149 (MQ=255) gACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACt > 1:2192991/1‑150 (MQ=255) acacCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTg > 1:1510512/1‑150 (MQ=255) acCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCAt < 1:2744254/75‑1 (MQ=255) acCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCAt > 2:2744254/1‑75 (MQ=255) acCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGa > 1:388233/1‑150 (MQ=255) tgatctgaacgacgTGCAGCGCATG‑GCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACgg > 1:334924‑M1/15‑116 (MQ=255) tgatctgaacgacgTGCAGCGCATG‑GCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACgg < 2:334924‑M1/102‑1 (MQ=255) cAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAAt > 1:2524078/1‑150 (MQ=255) aaTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGcgcg > 2:1379575/1‑55 (MQ=255) aaTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGcgcg < 1:1379575/55‑1 (MQ=255) aaTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACggc < 2:1121261/123‑1 (MQ=255) aaTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACggc > 1:1121261/1‑123 (MQ=255) aaTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATc < 2:2168917/150‑1 (MQ=255) aTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGgc < 2:1648645/58‑1 (MQ=255) aTGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGgc > 1:1648645/1‑58 (MQ=255) ggggCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGGCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCggg < 1:2570682/150‑1 (MQ=255) gggCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATgg > 2:2995683/1‑70 (MQ=255) gggCTGTCGTCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATgg < 1:2995683/70‑1 (MQ=255) gaacgacgTGCAGCGCATG‑GCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCAt > 2:2008253‑M1/9‑68 (MQ=255) gaacgacgTGCAGCGCATG‑GCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCAt < 1:2008253‑M1/60‑1 (MQ=255) cTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATc < 1:1084236/150‑1 (MQ=255) tCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGcc > 2:838178/1‑150 (MQ=255) tCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGcc > 1:719258/1‑150 (MQ=255) tCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCAATCTTGGCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGcc > 1:2806912/1‑150 (MQ=255) cgTGCAGCGCATG‑GCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACAAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCgg > 2:2670737‑M1/3‑142 (MQ=255) TGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGa < 2:506166‑M1/150‑1 (MQ=255) TGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGa > 2:2524078‑M1/1‑150 (MQ=255) | TTCACTGTCTTCGAGCACGAAAAAGTAACTCTCTTCACCGTTGAAGCTGACCTCGGCGGCGAAGGATGTCTCAGAGGCGGCAATCTTGTCGCCCAGACGAGCAGTGTCGTCCGGCAGCGAGGTGACACCAATGGGGCTGTCTGCAGC‑CATGCGCTGCACGTCGTTCAGATCAGCCATTTGCGCGGGGCGCATCACCAGCATGGTGTCACTCCTTTGGAATACGGGCCATTCACGTCGGCACGGAAAAACGGCAGGCACCCAGGCACCTGCACTGGAATCGGGTATCGCCGA > NC_002947/5090784‑5091074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |