| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,473,482:1 | +G | 5.6% | coding (121/693 nt) | nadD ← | nicotinate‑nucleotide adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,473,482 | 1 | . | G | 5.6% | 538.8 / 23.4 | 126 | coding (121/693 nt) | nadD | nicotinate‑nucleotide adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (56/63); new base G (3/4); total (59/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
CGACGCTCAGGCAAGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATCACCACATACTTCTCGCAGG > NC_002947/5473338‑5473629 | gCTCAGGCAAGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCt > 2:42848/1‑150 (MQ=255) tCAGGCAAGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCGGGGCATTGGGCAACAGGCGTAGCTCATCCAGCACCATGAACT‑CGGACACTT‑A‑CAGCGCGCTgc > 1:280806/1‑150 (MQ=255) ggCAAGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCa > 1:1195840/1‑150 (MQ=255) gCAAGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCaa < 2:1715934/150‑1 (MQ=255) gCAAGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCaa < 2:1752341/150‑1 (MQ=255) aGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTg < 2:2807265/150‑1 (MQ=255) gCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTgg > 1:1501725/1‑150 (MQ=255) aCGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑c > 1:1051320/1‑128 (MQ=255) aCGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑c < 2:1051320/128‑1 (MQ=255) cggccTGCACCGCTTCACGGAACATCGCCAGGCGGTCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGa < 2:941966/147‑1 (MQ=255) cGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGa < 2:2454623/150‑1 (MQ=255) cccTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGata > 2:336993/1‑150 (MQ=255) ccTTCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGatat > 1:1645441/1‑150 (MQ=255) ccTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATCACCA‑GTGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGatat > 1:160843/1‑150 (MQ=255) cACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGAGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTTGCGCAGCGCGCTG‑G‑AAGTGGCCGagttcatg < 2:2557651/150‑8 (MQ=37) ccGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACgg < 2:655455/150‑1 (MQ=255) aCGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGaa < 2:1195840/150‑1 (MQ=255) cGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGt < 1:1314615/145‑1 (MQ=255) cGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAg < 1:1160783/150‑1 (MQ=255) ggACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAgg < 1:2038311/150‑1 (MQ=255) ggACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAgg > 2:812/1‑150 (MQ=255) ggACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAAGAAGATCGCATCCAGCCCCATGAACTACGGCAAC‑A‑A‑CAGCGCGCTGCGCAAGTGGCCGATCTGCACGGGGACGAAgg > 1:2981633/1‑150 (MQ=255) gACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGt < 2:1645441/150‑1 (MQ=255) cATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTTGCGCAGCGCGCTG‑G‑AAGTGGCCGag > 1:295493/1‑128 (MQ=38) cATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTTGCGCAGCGCGCTG‑G‑AAGTGGCCGag < 2:295493/129‑2 (MQ=38) aTCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTacca > 2:1956164/1‑150 (MQ=255) tCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTaccac > 2:695541/1‑150 (MQ=255) cGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTaccacc < 2:803781/150‑1 (MQ=255) gCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGACGGTACCACCt > 1:1962187/1‑150 (MQ=255) ccAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTa > 1:1525883/1‑150 (MQ=255) ggCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGaa < 2:1800891/150‑1 (MQ=255) gCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTCGCCCCCCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAAt < 1:2493177/150‑1 (MQ=255) cGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATg < 1:812/150‑1 (MQ=255) gATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGc < 1:1965549/150‑1 (MQ=255) aTCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTc > 1:823147/1‑129 (MQ=255) aTCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGcc < 1:1976569/150‑1 (MQ=255) tGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATa > 2:853142/1‑150 (MQ=255) gcgcGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATAc < 2:481622/150‑1 (MQ=255) ccACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGa < 1:853142/150‑1 (MQ=255) ccACCTGTGGCGCGTCGCGGTGAGGCGACCGGGCATTGGGCACCAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGa < 2:160843/150‑1 (MQ=255) cACCTGTGGCGTGTCGCGGTGCGGAGGCCGGGCATTGGGAAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CACCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTCGAATGCCGATACGCCGGAc > 1:416262/1‑150 (MQ=255) aCCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTggac > 1:968062/1‑99 (MQ=255) aCCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACt > 1:169792/1‑150 (MQ=255) aCCTGGGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCAATT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACt < 2:416262/150‑1 (MQ=255) cTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATCGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGc > 2:2997239/1‑150 (MQ=255) tgGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCGCATCCAGCCCCATGACCT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTCGCCGCTCGGGACGTGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTg < 1:2382236/150‑1 (MQ=255) ggCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCGACGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTgg < 1:2338925/150‑1 (MQ=255) ggCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTgg < 1:336993/150‑1 (MQ=255) ggCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTgg < 1:2844224/150‑1 (MQ=255) gCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTg > 1:627717/1‑91 (MQ=255) gCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTg < 2:627717/91‑1 (MQ=255) gCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGcc < 2:331000/146‑1 (MQ=255) gCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGcc > 1:331000/1‑146 (MQ=255) gCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTggg > 2:2082832/1‑150 (MQ=255) tCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGGCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTg < 1:1614579/150‑1 (MQ=255) gcgGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTac < 2:1405696/110‑1 (MQ=255) gcgGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTa < 1:2678816/116‑1 (MQ=255) gcgGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTa > 2:2678816/1‑116 (MQ=255) ggcCGGGAATTGGGCAACAGGCGTCGCTCATCCCGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTcagca < 2:1697559/150‑1 (MQ=255) gggCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGAc < 2:2311564/150‑1 (MQ=255) gCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGAccc < 1:1956164/150‑1 (MQ=255) aTTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTTGCGCAGCGCGCTgg < 1:2423482/61‑2 (MQ=25) aTTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTTGCGCAGCGCGCTgg > 2:2423482/1‑60 (MQ=25) aTTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCt < 1:695541/150‑1 (MQ=255) ttGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTg < 2:1238585/150‑1 (MQ=255) gCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCCCCT‑C‑CCGCGCGCCTCGCCAGGGGCCCATAATCCCGGGGTCGAAGGTACCCCCTAAAAAGCCCATACGCCGGACCTCCCGGGCCTTGCCCAACTCAGCCAGAACCCTTGccc > 2:49959/1‑149 (MQ=255) gCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGc > 1:2819418/1‑99 (MQ=255) gCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGa > 1:1450699/1‑140 (MQ=255) gCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGa < 2:1450699/140‑1 (MQ=255) gCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCcg > 1:1462165/1‑150 (MQ=255) gCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCcg > 2:2738697/1‑150 (MQ=255) aaCAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATTCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCcgcg > 1:354624/1‑150 (MQ=255) aaCAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGAccc > 1:1701645/1‑141 (MQ=255) aaCAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGAccc < 2:1701645/141‑1 (MQ=255) aaCAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCcgcg > 1:2563210/1‑150 (MQ=255) aCAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCgcgc > 2:55213/1‑150 (MQ=255) cAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGAACACCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCa > 1:505413/1‑150 (MQ=255) gCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTgg < 1:2126423/112‑1 (MQ=255) cGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTg < 2:1687019/150‑1 (MQ=255) gTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTgg > 2:2894621/1‑150 (MQ=255) aGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGACTGATTTCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGcc < 1:1753783/150‑1 (MQ=255) cTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCAt > 2:203795/1‑150 (MQ=255) gtCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATCGGCCTTACTGCCTGGGCCTTGCCCAACTAAGCAGGACCCCTGGCCGCGCAACTGGCCATAGc > 2:2105674/2‑150 (MQ=255) cAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGa < 1:49959/150‑1 (MQ=255) aGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAAc < 2:2798519/111‑1 (MQ=255) aGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAAc > 1:2798519/1‑111 (MQ=255) aGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGAt > 1:717780/1‑150 (MQ=255) ccATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTaccac < 2:2587067/66‑1 (MQ=255) ccATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTaccac > 1:2587067/1‑66 (MQ=255) cATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATcacca < 2:463192/150‑1 (MQ=255) tat‑CGGCCACTTGCGCAGCGCGCTG‑G‑AAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATca > 2:2222966/3‑142 (MQ=38) tat‑CGGCCACTTGCGCAGCGCGCTG‑G‑AAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATca < 1:2222966/140‑1 (MQ=38) cT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGAccc > 2:2930687/1‑112 (MQ=255) cT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGAGACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGAccc < 1:2930687/112‑1 (MQ=255) ggCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATc < 2:912986/137‑1 (MQ=255) ggCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATc > 1:912986/1‑137 (MQ=255) ccACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGaa < 2:509545/60‑1 (MQ=255) ccACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGaa > 1:509545/1‑60 (MQ=255) ccACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATCACCACATACTTCTCg > 2:2715465/1‑150 (MQ=255) cACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATCACCACATACTTCTCGc > 1:1795133/1‑150 (MQ=255) | CGACGCTCAGGCAAGCGACGCCCTGCACCGCTTCACGGACCATCGCCAGGCGATCCTGCGCGGCCACCTGTGGCGTGTCGCGGTGCGGCGGCCGGGCATTGGGCAACAGGCGTAGCTCATCCAGCCCCATGAACT‑CGGCCACTT‑C‑CAGCGCGCTGCGCAAGTGGCCGATATGCACGGGGTCGAAGGTACCACCTAGAATGCCGATACGCCGGACTGCCTGGGCCTTGCTCAACTCAGCAGGACCCCTGGCCGCGCAACTGGCCATCGCCGATCACCACATACTTCTCGCAGG > NC_002947/5473338‑5473629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |