| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 295713 | 111 (0.970) | 10 (0.100) | 8/216 | NT | 8.5% | intergenic (+60/+82) | PP_0241/PP_0242 | transporter/TetR family transcriptional regulator |
| ? | NC_002947 | = 295744 | 117 (1.150) | intergenic (+91/+51) | PP_0241/PP_0242 | transporter/TetR family transcriptional regulator | |||||
TCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/295552‑295713‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTGCCC < NC_002947/295744‑295596 TCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGC < 1:512105/150‑1TCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGC > 1:2961926/1‑150 CGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGGTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCC > 1:2748828/1‑150 TTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCC < 2:571917/150‑1 TTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCC < 2:355333/150‑1 CCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGGTTGGCAGCCCTTCGCCGGCACGCCCGCTCCCAC > 2:1019762/1‑150 CACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACA > 2:693784/1‑150 CACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGC < 2:2781158/139‑1 CACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGC > 1:2781158/1‑139 ACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG < 2:841132/150‑1 ACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG > 2:1017179/1‑150 ACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG < 2:2661490/150‑1 ACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG < 1:1867488/150‑1 CCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGCTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCGCAcg > 2:2266904/1‑148 TTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAAGCCCGCTCCCACAGAGCCC > 1:986787/1‑150 GTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGG < 1:718855/150‑1 GTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGG < 2:2020324/150‑1 ATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCGCGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGG < 1:2080464/142‑1 ATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGG > 2:2080464/1‑142 TTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGGCCCGCGCGCACCCTGGAGCTT > 1:582647/1‑127 TTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGGCCCGCGCGCACCCTGGAGCTT < 2:582647/127‑1 CTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCC < 1:2947524/150‑1 GTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGG < 2:986787/150‑1 CGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGC > 1:348088/1‑77 CGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGC < 2:348088/77‑1 ATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCT > 2:1005/1‑81 ATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCT < 1:1005/81‑1 CCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCA < 2:224977/150‑1 CGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCAC < 1:1100873/150‑1 CGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGCCGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCAC < 1:965915/150‑1 cCCCACAGCGCGCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTC < 2:648225/149‑1 CACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACT < 1:313871/150‑1 CACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACT < 2:613772/150‑1 CACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGC < 1:515407/68‑1 CACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGC > 2:515407/1‑68 ACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTG > 1:935523/1‑150 ACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTG > 1:201348/1‑150 ACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATA < 1:1757264/111‑1 ACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATA > 2:1757264/1‑111 GAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTGCCC < 2:744849/150‑1 TCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/295552‑295713‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTGCCC < NC_002947/295744‑295596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |