| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 414130 = | 72 (0.630) | 5 (0.050) | 5/228 | NT | 6.0% | intergenic (+147/‑56) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_002947 | 414167 = | 89 (0.830) | intergenic (+184/‑19) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II | |||||
TCGATCACGCAGTCGGGGTGCTGCTGTTTCAGGCACTGGAACAGGGTCTGCGCCATCACCATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGCCTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/414286‑414130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctccccGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAATGGAGCCGGCCGA > NC_002947/414167‑414315 TCGATCACGCAGTCGGGGTGCTGCTGTTTCAGGCACTGGAACAGGGTCTGCGCCATCACCATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGG > 2:318126/1‑150TCGATCACGCAGTCGGGGTGCTGCTGTTTCAGGCACTGGAACAGGGTCTGCGCCATCACCATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGG < 2:2788289/150‑1 ATCACGCAGTCGGGGTGCTGCTGTTTCAGGCACTGGAACAGGGTCTGCGCCATCACCATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGCCT > 1:1489730/1‑150 TCACGCAGTCGGGGTGCTGCTGTTTCAGGCACTGGAACAGGGTCTGCGCCATCACCATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGCCTC < 1:1852589/150‑1 ATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGC > 1:101272/1‑91 ATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGC < 2:101272/91‑1 GCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGCCTCCCCAAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGAC < 2:1622946/99‑1 GCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGCCTCCCCAAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGAC > 1:1622946/1‑99 GGGAGGCTACAGGCTGCGGTACAGCCTGGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGT > 1:1757953/1‑150 AGGCTACAGGCTGCGGTACAGCCTGGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGC < 1:87457/88‑1 AGGCTACAGGCTGCGGTACAGCCTGGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGC > 2:87457/1‑88 GCCTGGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAAT < 2:1757953/150‑1 GCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAATGGAGC < 2:2787945/150‑1 CCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATAATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAATGGAGCC > 1:2922410/1‑150 CTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAATGGAGCCG > 2:521369/1‑150 CTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAATGGAGCCG < 2:925004/150‑1 CCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGGTCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAG > 1:289684/1‑101 CCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGGTCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAG < 2:289684/101‑1 CCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCC > 1:925766/1‑133 CCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCC < 2:925766/133‑1 CGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAATGGAGCCGGCCGA > 2:420368/1‑150 TCGATCACGCAGTCGGGGTGCTGCTGTTTCAGGCACTGGAACAGGGTCTGCGCCATCACCATGTCGCCGACCCAGCTGGGGCCAATGATCAGTATTCTCATGCTTAGTCCAGAAACGCTCGGGGAGGCTACAGGCTGCGGTACAGCCTGGCCTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/414286‑414130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctccccGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCGACGTGCTGGCCCCTGAATGGAGCCGGCCGA > NC_002947/414167‑414315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |